RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 MRPS18AQ9NVS2 196 aaKnown RBP6.09□□□□□ -1.43
CUBNP3-201ENST00000457461 TMEM242Q9NWH2 141 aa6.09□□□□□ -1.43
CUBNP3-201ENST00000457461 GPR83Q9NYM4 423 aa6.09□□□□□ -1.43
CUBNP3-201ENST00000457461 CDC42EP3Q9UKI2 254 aa6.09□□□□□ -1.43
CUBNP3-201ENST00000457461 PILRBQ9UKJ0 227 aa6.09□□□□□ -1.43
CUBNP3-201ENST00000457461 SRPK3Q9UPE1 567 aa6.09□□□□□ -1.43
CUBNP3-201ENST00000457461 SF3B6Q9Y3B4 125 aaKnown RBP6.09□□□□□ -1.43
CUBNP3-201ENST00000457461 ZNF318Q5VUA4 2279 aa6.09□□□□□ -1.44
CUBNP3-201ENST00000457461 VPS13AQ96RL7 3174 aa6.09□□□□□ -1.44
CUBNP3-201ENST00000457461 SEC16AO15027 2179 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 FXYD6-FXYD2A0A087WZ82 144 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 A0A1B0GVT2 93 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 A4D1N5 150 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 NKX2-6A6NCS4 301 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ARRDC5A6NEK1 342 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 B4DGG1 531 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 HYAL3O43820 417 aaPredicted RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ENTPD6O75354 484 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 RBMXL2O75526 392 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 LRATO95237 230 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 B3GALT4O96024 378 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 HLA-DPB1P04440 258 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 FABP3P05413 133 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SERPIND1P05546 499 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 KLK1P06870 262 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 FAM157CP0CG43 387 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SMIM17P0DL12 118 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 CD37P11049 281 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 COX7A2P14406 83 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 GPX2P18283 190 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 RAB6AP20340 208 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PRKACGP22612 351 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 MMP11P24347 488 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 EPHA2P29317 976 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 DCTDP32321 178 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PTGER4P35408 488 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 FRKP42685 505 aaPredicted RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 RPS10P46783 165 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SLC6A9P48067 706 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 NPY4RP50391 375 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PDX1P52945 283 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 TAS2R50P59544 299 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ARF3P61204 181 aaPredicted RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ARF1P84077 181 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 RBBP4Q09028 425 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ABHD18Q0P651 414 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 CRMP1Q14194 572 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 NKG7Q16617 165 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 FBLN7Q53RD9 439 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 GLT8D1Q68CQ7 371 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 HBMQ6B0K9 141 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 OR4C11Q6IEV9 310 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 OR2T2Q6IF00 324 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ABHD17CQ6PCB6 329 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ZNF793Q6ZN11 406 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 CALHM3Q86XJ0 350 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 CALHM1Q8IU99 346 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SIAH3Q8IW03 269 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 UBE2FQ969M7 185 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 MCHR2Q969V1 340 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 TMEM186Q96B77 213 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 HAVCR1Q96D42 359 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 REEP6Q96HR9 211 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 IMMP2LQ96T52 175 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 POLR2J2Q9GZM3 115 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 FXYD6Q9H0Q3 95 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SLCO5A1Q9H2Y9 848 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PLK3Q9H4B4 646 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 IKZF5Q9H5V7 419 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 CNTD2Q9H8S5 307 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SRA1Q9HD15 236 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PARP11Q9NR21 331 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 HRASLS2Q9NWW9 162 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ZNF226Q9NYT6 803 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 HIF3AQ9Y2N7 669 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 RPL36Q9Y3U8 105 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 C1orf226A1L170 272 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 TVP23AA6NH52 213 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 DHRS7CA6NNS2 312 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SAP18O00422 153 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ARPC3O15145 178 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 TMPRSS11DO60235 418 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 CSO75390 466 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 OR2C1O95371 312 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 IL3P08700 152 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 ELK1P19419 428 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 HIST1H1TP22492 207 aaPredicted RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 CNR2P34972 360 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SOX18P35713 384 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 RBM34P42696 430 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 GZMMP51124 257 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PCBP4P57723 403 aaKnown RBP6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 TAS2R19P59542 299 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PPP1CAP62136 330 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PAX2Q02962 417 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 MEF2DQ14814 521 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 SYPL1Q16563 259 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PRSS53Q2L4Q9 553 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 MST1LQ2TV78 715 aa6.08□□□□□ -1.44
CUBNP3-201ENST00000457461 PRTGQ2VWP7 1150 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms