RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CRTAPO75718 401 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 AKAIN1P0CW23 69 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 PVRP15151 417 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 RPS12P25398 132 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 DHPSP49366 369 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 DVL1P1P54792 670 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 SMIM11AP58511 58 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 MRPS10P82664 201 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 RTP5Q14D33 572 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 MLC1Q15049 377 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNHIT3Q15649 155 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 TMEM225Q6GV28 225 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 KMT5CQ86Y97 462 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 GID4Q8IVV7 300 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 SAXO1Q8IYX7 474 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 STPG4Q8N801 248 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 S100PBPQ96BU1 408 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 KTI12Q96EK9 354 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF385AQ96PM9 386 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 SLC25A21Q9BQT8 299 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 CALHM2Q9HA72 323 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 PRM3Q9NNZ6 103 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 YIPF1Q9Y548 306 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 FN1P02751 2386 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 TNRC6AQ8NDV7 1962 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 H3BQ15 152 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 GPRIN2O60269 458 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 YPEL1O60688 119 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 IL11P20809 199 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 GDI1P31150 447 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 MMP16P51512 607 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 TDGF1P3P51864 188 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 RAB2AP61019 212 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 PITPNAQ00169 270 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 SP3Q02447 781 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 GGTLC2Q14390 218 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 LEG1Q6P5S2 330 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 SLC24A5Q71RS6 500 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF101Q8IZC7 436 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF417Q8TAU3 575 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 ANKRD9Q96BM1 317 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 SAT2Q96F10 170 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 YPEL2Q96QA6 119 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 OR5B2Q96R09 309 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 SERINC2Q96SA4 455 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 TCEAL2Q9H3H9 227 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 BANF2Q9H503 90 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 GSKIPQ9P0R6 139 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 ABCA12Q86UK0 2595 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 PTPRBP23467 1997 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 STMND1H3BQB6 276 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 CCL25O15444 150 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 RDH16O75452 317 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 BGLAPP02818 100 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 CALCBP10092 127 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 HERPUD1Q15011 391 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 TCEAL5Q5H9L2 206 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 HOGA1Q86XE5 327 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 EID2Q8N6I1 236 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 POC1BQ8TC44 478 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 DDA1Q9BW61 102 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 LPAR5Q9H1C0 372 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 DPEP2Q9H4A9 486 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 GLRX2Q9NS18 164 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 MCTS1Q9ULC4 181 aaKnown RBP3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 LIPGQ9Y5X9 500 aa3.99□□□□□ -1.77
DEPDC1-202ENST00000456315 UBE2QL1A1L167 161 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNHIT1O43257 154 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 IGHG1P01857 330 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CT45A8P0DMV1 189 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CT45A9P0DMV2 189 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF616Q08AN1 781 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 P2RY6Q15077 328 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 KCNMB1Q16558 191 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CT45A2Q5DJT8 189 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 FBXW9Q5XUX1 488 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 PLXDC2Q6UX71 529 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 RCBTB1Q8NDN9 531 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 OR52M1Q8NGK5 317 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 OR13G1Q8NGZ3 307 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 GPR119Q8TDV5 335 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 VSIRQ9H7M9 311 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 POLR3KQ9Y2Y1 108 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 FLVCR1Q9Y5Y0 555 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CCDC163A0A0D9SF12 145 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 C5orf51A6NDU8 294 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 PRR19A6NJB7 356 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 PFN1P07737 140 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 DANCRP0C864 163 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 PNLIPRP3Q17RR3 467 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 PRSS54Q6PEW0 395 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 LYZL2Q7Z4W2 148 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 OR5D18Q8NGL1 313 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 OR1N1Q8NGS0 311 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 FLVCR1-AS1Q8TAF5 88 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 ARRDC3Q96B67 414 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 SLC25A44Q96H78 314 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 TAF9BQ9HBM6 251 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 VSX1Q9NZR4 365 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 LRRK2Q5S007 2527 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms