RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ITPKCQ96DU7 683 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 ADAT3Q96EY9 351 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-204ENST00000452182 ADAT1Q9BUB4 502 aaKnown RBP9.85□□□□□ -0.83
SCN9A-204ENST00000452182 RAB1BQ9H0U4 201 aa9.85□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF701Q9NV72 531 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-204ENST00000452182 TRBV5-7A0A0A0MS05 114 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 ANXA2P2A6NMY6 339 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF850A8MQ14 1090 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 H3BSH0 61 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 LMX1BO60663 402 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 PTBP3O95758 552 aaKnown RBP9.84□□□□□ -0.83
SCN9A-204ENST00000452182 NRASP01111 189 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 TFAP2AP05549 437 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 ERCC1P07992 297 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF20P17024 532 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 TNFSF4P23510 183 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 RPS25P62851 125 aaKnown RBP9.84□□□□□ -0.83
SCN9A-204ENST00000452182 MZT1Q08AG7 82 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 PRDX4Q13162 271 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 OR8G1Q15617 311 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 CEACAM21Q3KPI0 293 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 ACSM3Q53FZ2 586 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF529Q6P280 563 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 ZDHHC23Q8IYP9 409 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 OR2Z1Q8NG97 314 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 OR5D14Q8NGL3 314 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 OR13C5Q8NGS8 318 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 NEU4Q8WWR8 484 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-204ENST00000452182 OR5P3Q8WZ94 311 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 GTF3AQ92664 365 aaKnown RBP9.84□□□□□ -0.83
SCN9A-204ENST00000452182 MBD6Q96DN6 1003 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 ELMOD3Q96FG2 381 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 LURAP1Q96LR2 239 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 DERL3Q96Q80 235 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 TMED9Q9BVK6 235 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 IL19Q9UHD0 177 aa9.84□□□□□ -0.83
SCN9A-204ENST00000452182 CSMD2Q7Z408 3487 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 CACNA1DQ01668 2161 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.83□□□□□ -0.84
SCN9A-204ENST00000452182 SPRY3O43610 288 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 GPX5O75715 221 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 FSTP19883 344 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 CDKN1AP38936 164 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 CD200P41217 278 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 MAGEB1P43366 347 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 SOX2P48431 317 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 ALDH3B2P48448 385 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 TESK1Q15569 626 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 FAM76BQ5HYJ3 339 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 ZCCHC24Q8N2G6 241 aaKnown RBP9.83□□□□□ -0.84
SCN9A-204ENST00000452182 OR10AD1Q8NGE0 317 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 OR5A2Q8NGI9 324 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 OR8S1Q8NH09 359 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 TMEM203Q969S6 136 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 HIST1H2AAQ96QV6 131 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 OR14A2Q96R54 314 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 VRK1Q99986 396 aaPredicted RBP9.83□□□□□ -0.84
SCN9A-204ENST00000452182 EGLN1Q9GZT9 426 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 ZCCHC4Q9H5U6 513 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 BEX4Q9NWD9 120 aaPredicted RBP9.83□□□□□ -0.84
SCN9A-204ENST00000452182 C14orf119Q9NWQ9 140 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 SCOCQ9UIL1 159 aa9.83□□□□□ -0.84
SCN9A-204ENST00000452182 TRDV1A0A1B0GX56 115 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 A6NIN4 97 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 OR5B21A6NL26 309 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 F5H5P2 479 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 H0YL77 283 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 RGS9O75916 674 aaPredicted RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 UCHL1P09936 223 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 TNFRSF1AP19438 455 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 DNASE1P24855 282 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 TGFBR2P37173 567 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 GATA4P43694 442 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 SRP9P49458 86 aaKnown RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 MRPS11P82912 194 aaKnown RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 TNFAIP6P98066 277 aaPredicted RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 FABP5Q01469 135 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 MAB21L1Q13394 359 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CNN3Q15417 329 aaKnown RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 UBE2V2Q15819 145 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 ASPHD2Q6ICH7 369 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 TMEM91Q6ZNR0 172 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 DNAAF1Q8NEP3 725 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 OR13F1Q8NGS4 319 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 HPSE2Q8WWQ2 592 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 SPSB1Q96BD6 273 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 TRMT61AQ96FX7 289 aaKnown RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 SORCS2Q96PQ0 1159 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 MICU1Q9BPX6 476 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 RTL8AQ9BWD3 113 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 GSX2Q9BZM3 304 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CXXC4Q9H2H0 198 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 TPK1Q9H3S4 243 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 PPP1R3EQ9H7J1 279 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CKLFQ9UBR5 152 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 STUB1Q9UNE7 303 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 PLEKHA6Q9Y2H5 1048 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CHD3Q12873 2000 aaKnown RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 ABCA12Q86UK0 2595 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 LOC100289279A0A1B0GTE1 492 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms