RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 SEMA6AQ9H2E6 1030 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 METTL8Q9H825 291 aaKnown RBP8.93□□□□□ -0.98
USP1-204ENST00000452143 ZNF446Q9NWS9 450 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 NDE1Q9NXR1 346 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 HAO2Q9NYQ3 351 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 DNAJB11Q9UBS4 358 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 DUX4Q9UBX2 424 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 ZNF391Q9UJN7 358 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 N6AMT1Q9Y5N5 214 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 MPC1Q9Y5U8 109 aa8.93□□□□□ -0.98
USP1-204ENST00000452143 ZNF816-ZNF321PA0A0X1KG74 233 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 RIIAD1A6NNX1 92 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 CDIPTO14735 213 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 CCNB2O95067 398 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 GASTP01350 101 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 CSF1P09603 554 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 CLUP10909 449 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 AMY2BP19961 511 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 OPRL1P41146 370 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 UBE2E1P51965 193 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 CAV3P56539 151 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 ZNF121P58317 390 aaPredicted RBP8.92□□□□□ -0.98
USP1-204ENST00000452143 EGR3Q06889 387 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 EIF2B1Q14232 305 aaKnown RBP8.92□□□□□ -0.98
USP1-204ENST00000452143 KLHL12Q53G59 568 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 ZNF788Q6ZQV5 615 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 FAM57BQ71RH2 274 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 Q8N7P7 452 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 BEND2Q8NDZ0 799 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 OR6N2Q8NGY6 317 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 OR4Q3Q8NH05 313 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 H1FXQ92522 213 aaKnown RBP8.92□□□□□ -0.98
USP1-204ENST00000452143 TNFRSF14Q92956 283 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 MED30Q96HR3 178 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 RAB3IPQ96QF0 476 aaPredicted RBP8.92□□□□□ -0.98
USP1-204ENST00000452143 ABHD6Q9BV23 337 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 DGCR6LQ9BY27 220 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 CMC2Q9NRP2 79 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 SLC25A10Q9UBX3 287 aaPredicted RBP8.92□□□□□ -0.98
USP1-204ENST00000452143 FBLN5Q9UBX5 448 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 RHBDD3Q9Y3P4 386 aa8.92□□□□□ -0.98
USP1-204ENST00000452143 MEIOCA2RUB1 952 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 ANKRD61A6NGH8 418 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 SIGLEC5O15389 551 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 PLXNB1O43157 2135 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 SOX14O95416 240 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 CST4P01036 141 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 GABRA5P31644 462 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 MSX2P35548 267 aaPredicted RBP8.91□□□□□ -0.98
USP1-204ENST00000452143 ELF3P78545 371 aaPredicted RBP8.91□□□□□ -0.98
USP1-204ENST00000452143 MXRA7P84157 204 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 BLMHQ13867 455 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 GFOD2Q3B7J2 385 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 FAM76BQ5HYJ3 339 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 C16orf89Q6UX73 402 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 SHFQ7M4L6 423 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 CPLX4Q7Z7G2 160 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 ERI1Q8IV48 349 aaKnown RBP8.91□□□□□ -0.98
USP1-204ENST00000452143 PAPD5Q8NDF8 572 aaKnown RBP8.91□□□□□ -0.98
USP1-204ENST00000452143 OR5D13Q8NGL4 314 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 ANGPTL6Q8NI99 470 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 OR5P3Q8WZ94 311 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 SEH1LQ96EE3 360 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 PGAM5Q96HS1 289 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 GAFA1Q96PS6 74 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 CDRT15Q96T59 188 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 ELAC2Q9BQ52 826 aaKnown RBP8.91□□□□□ -0.98
USP1-204ENST00000452143 MAGIXQ9H6Y5 334 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 RAB18Q9NP72 206 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 ARMC1Q9NVT9 282 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 DNAJC27Q9NZQ0 273 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 ACTR3BQ9P1U1 418 aa8.91□□□□□ -0.98
USP1-204ENST00000452143 NOTCH3Q9UM47 2321 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 TRBV23-1A0A0A0MS06 115 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 A0A1W2PQ09 198 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 SNX3O60493 162 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 GLCEO94923 617 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 LYNP07948 512 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 H2BFMP0C1H6 154 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 SELLP14151 372 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 GSTT1P30711 240 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 PSMA6P60900 246 aaKnown RBP8.9□□□□□ -0.98
USP1-204ENST00000452143 PRDX4Q13162 271 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 KLRD1Q13241 179 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 GK3PQ14409 553 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 HERPUD1Q15011 391 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 AANATQ16613 207 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 MICAQ29983 383 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 CD300LDQ6UXZ3 194 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 Q6ZTK2 550 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 C1QL4Q86Z23 238 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 TIGD4Q8IY51 512 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 DTX3Q8N9I9 347 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 FAM110DQ8TAY7 271 aaPredicted RBP8.9□□□□□ -0.98
USP1-204ENST00000452143 TEX47Q8TBZ9 253 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 HPSE2Q8WWQ2 592 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 ITFG2Q969R8 447 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 FAM234AQ9H0X4 552 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 WDR13Q9H1Z4 485 aa8.9□□□□□ -0.98
USP1-204ENST00000452143 PPA2Q9H2U2 334 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms