RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CUBNO60494 3623 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 INTS1Q8N201 2190 aaKnown RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 ACTL6AO96019 429 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 CELA3BP08861 270 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 ATF4P18848 351 aaPredicted RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 RCVRNP35243 200 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 ZNF84P51523 738 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 TDGF1P3P51864 188 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 FOXF2Q12947 444 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 IKZF1Q13422 519 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 DOK3Q7L591 496 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 OR13C9Q8NGT0 318 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 BEX2Q9BXY8 128 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 GLS2Q9UI32 602 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 SHANK1Q9Y566 2161 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 ZNF726A6NNF4 738 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 RRP8O43159 456 aaKnown RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 CD3DP04234 171 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 IGHV1-2P23083 117 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 RBMXP38159 391 aaKnown RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 RAD52P43351 418 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 PRKXP51817 358 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 H2BFSP57053 126 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 DHODHQ02127 395 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 TBRG1Q3YBR2 411 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 TMEM69Q5SWH9 247 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 ABHD12BQ7Z5M8 362 aaPredicted RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 AKAP14Q86UN6 197 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 CALHM1Q8IU99 346 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 C9orf62Q8N4C0 152 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 FER1L6-AS2Q96M78 137 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 MCUBQ9NWR8 336 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 MCTS1Q9ULC4 181 aaKnown RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 CNTRLQ7Z7A1 2325 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 PYCARD-AS1I3L0S3 204 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 SYT7O43581 403 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 AADACL3Q5VUY0 350 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 LHFPL1Q86WI0 220 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 WDR31Q8NA23 367 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 C9orf106Q8NAJ2 232 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 Q96M66 194 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 RBM24Q9BX46 236 aaKnown RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 HDHD2Q9H0R4 259 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 ZMAT3Q9HA38 289 aaKnown RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 DECR2Q9NUI1 292 aa5.68□□□□□ -1.5
USP46-202ENST00000451218 KLF13Q9Y2Y9 288 aaPredicted RBP5.68□□□□□ -1.5
USP46-202ENST00000451218 PQLC2LA1A4F0 135 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 MEIS3P1A6NDR6 274 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 ANXA2P2A6NMY6 339 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 AQP7O14520 342 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 NGFP01138 241 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 ANXA2P07355 339 aaKnown RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 THBS4P35443 961 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 OR3A2P47893 321 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 RPS27AP62979 156 aaKnown RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 SRSF4Q08170 494 aaKnown RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 FCN2Q15485 313 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 KISS1Q15726 138 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 PABPC1L2AQ5JQF8 200 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 DRAM2Q6UX65 266 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 GLDNQ6ZMI3 551 aaPredicted RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 AAED1Q7RTV5 226 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 ZBTB8BQ8NAP8 495 aaPredicted RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 OR1K1Q8NGR3 316 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 GIMAP1Q8WWP7 306 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 TMEM230Q96A57 120 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 C10orf35Q96D05 121 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 SLC6A7Q99884 636 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 TINAGL1Q9GZM7 467 aaPredicted RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 MOV10Q9HCE1 1003 aaKnown RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 ZNF629Q9UEG4 869 aaPredicted RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 VSIG4Q9Y279 399 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 NUBP2Q9Y5Y2 271 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 GTF3C1Q12789 2109 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 TMEM235A6NFC5 223 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 A6NL46 340 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 DBX1A6NMT0 343 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 OR2A4O95047 310 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 HNRNPCP07910 306 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP46-202ENST00000451218 YES1P07947 543 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 ARF1P84077 181 aaKnown RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 SGCAQ16586 387 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 ZNF626Q68DY1 528 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 Q6ZS92 163 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 OR4S1Q8NGB4 309 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 SORCS2Q96PQ0 1159 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 OR2A7Q96R45 310 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 C7orf50Q9BRJ6 194 aaKnown RBP5.67□□□□□ -1.5
USP46-202ENST00000451218 CEP295Q9C0D2 2601 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 MEIKINA0A087WXM9 373 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 A0A0A6YYH2 397 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 A6NJ64 397 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 OR2AT4A6NND4 320 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 SGCEO43556 437 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 TRAPPC6AO75865 159 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 KRT33AO76009 404 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 PRKAR1AP10644 381 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 GNB3P16520 340 aa5.67□□□□□ -1.5
USP46-202ENST00000451218 VEGFCP49767 419 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms