RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 TFP02787 698 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 ALDOBP05062 364 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 PRR23D2P0DMB1 279 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-203ENST00000449575 S100A11P31949 105 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF133P52736 654 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-203ENST00000449575 RAP1BP61224 184 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 RAP1AP62834 184 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 GK2Q14410 553 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-203ENST00000449575 OR2G6Q5TZ20 316 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 BCDIN3DQ7Z5W3 292 aaKnown RBP8.58□□□□□ -1.04
CCDC171-203ENST00000449575 MYPOPQ86VE0 399 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-203ENST00000449575 TMEM17Q86X19 198 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 LRRC46Q96FV0 321 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 ALG12Q9BV10 488 aa8.58□□□□□ -1.04
CCDC171-203ENST00000449575 VSX1Q9NZR4 365 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-203ENST00000449575 COA3Q9Y2R0 106 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-203ENST00000449575 OR5H1A6NKK0 313 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 G3V3Q6 166 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 PYCR1P32322 319 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 SORDQ00796 357 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 MEP1BQ16820 701 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 SLC36A2Q495M3 483 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 THEM4Q5T1C6 240 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 C10orf128Q5T292 105 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF813Q6ZN06 617 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 WFDC8Q8IUA0 241 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 SKA3Q8IX90 412 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 LRRC18Q8N456 261 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 OR1M1Q8NGA1 313 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 NABP1Q96AH0 204 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 RNFT2Q96EX2 444 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 SEC61A2Q9H9S3 476 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 TMEM38BQ9NVV0 291 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF593O00488 134 aaPredicted RBP8.57□□□□□ -1.04
CCDC171-203ENST00000449575 SURF4O15260 269 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 GATCO43716 136 aaKnown RBP8.57□□□□□ -1.04
CCDC171-203ENST00000449575 HLA-HP01893 362 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 CXCL2P19875 107 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 ATP6V1E1P36543 226 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 MMP15P51511 669 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 ZP1P60852 638 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 B3GLCTQ6Y288 498 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 C1orf122Q6ZSJ8 110 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 PGAP1Q75T13 922 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 CCDC36Q8IYA8 594 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 KLHL36Q8N4N3 616 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 BBS1Q8NFJ9 593 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 HSD17B8Q92506 261 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 MRPS24Q96EL2 167 aaKnown RBP8.57□□□□□ -1.04
CCDC171-203ENST00000449575 PDCD10Q9BUL8 212 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 TMED9Q9BVK6 235 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 SLC25A32Q9H2D1 315 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 CMC2Q9NRP2 79 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 EDARQ9UNE0 448 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 SLC25A15Q9Y619 301 aa8.57□□□□□ -1.04
CCDC171-203ENST00000449575 MAP1AP78559 2803 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 IGLV1-36A0A0B4J1U3 117 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 HMSDA8MTL9 139 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 MCRIP1C9JLW8 97 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SSX5O60225 188 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 RGS9O75916 674 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 KDM4BO94953 1096 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 CELA3BP08861 270 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 RPS27P42677 84 aaKnown RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 MTNR1AP48039 350 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 DEFA5Q01523 94 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 HLXQ14774 488 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 ANKRD16Q6P6B7 361 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 CORO6Q6QEF8 472 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 ABHD12BQ7Z5M8 362 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF295-AS1Q8N0V1 137 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SLC22A24Q8N4F4 322 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SAMD12Q8N8I0 201 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 STEAP2Q8NFT2 490 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 HINT3Q9NQE9 182 aaKnown RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SLC17A5Q9NRA2 495 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 BABAM2Q9NXR7 383 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 B9D1Q9UPM9 204 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 A0A1W2PPR1 153 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 NAP1L6A6NFF2 107 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SC5DO75845 299 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 RGS11O94810 467 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 UBL3O95164 117 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 EIF4EP06730 217 aaKnown RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 MAPK3P27361 379 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SRP9P49458 86 aaKnown RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 BDH1Q02338 343 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 TGFBR3Q03167 851 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SNTB2Q13425 540 aaKnown RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SGCAQ16586 387 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 SWI5Q1ZZU3 235 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 TIMM23BQ5SRD1 257 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 OR7E24Q6IFN5 339 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 ATRAIDQ6UW56 229 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 TPRA1Q86W33 373 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 OR52N1Q8NH53 320 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 OR1S1Q8NH92 325 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 HS3ST6Q96QI5 342 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 C20orf85Q9H1P6 137 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms