RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 ZDHHC23Q8IYP9 409 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 ASB17Q8WXJ9 295 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 OR5P3Q8WZ94 311 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 UTP4Q969X6 686 aaKnown RBP16.33■□□□□ 0.2
VCP-203ENST00000448530 RNF170Q96K19 258 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 C1orf147Q96MC9 270 aaPredicted RBP16.33■□□□□ 0.2
VCP-203ENST00000448530 WDFY2Q96P53 400 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 CCL13Q99616 98 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 PKP2Q99959 881 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 TLNRD1Q9H1K6 362 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 DNAJB11Q9UBS4 358 aa16.33■□□□□ 0.2
VCP-203ENST00000448530 SOX21Q9Y651 276 aaPredicted RBP16.33■□□□□ 0.2
VCP-203ENST00000448530 TMEM269A0A1B0GVZ9 245 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 G3V2T6 193 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 PSMD9O00233 223 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 ZNF254O75437 659 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 SFTPBP07988 381 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 GMFBP60983 142 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 PDCD1Q15116 288 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 ATP6AP1Q15904 470 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 WDR38Q5JTN6 314 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 ITFG2Q969R8 447 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 C12orf43Q96C57 262 aaKnown RBP16.32■□□□□ 0.2
VCP-203ENST00000448530 LYZL4Q96KX0 146 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 CNN2Q99439 309 aaKnown RBP16.32■□□□□ 0.2
VCP-203ENST00000448530 IKZF2Q9UKS7 526 aa16.32■□□□□ 0.2
VCP-203ENST00000448530 A0A0U1RQV5 110 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 ZNF816-ZNF321PA0A0X1KG74 233 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 MDFIC2A0A1B0GVS7 189 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 SRRM5B3KS81 715 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 NDUFB3O43676 98 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 ATP5HO75947 161 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 FASP25445 335 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 RIDAP52758 137 aaKnown RBP16.31■□□□□ 0.2
VCP-203ENST00000448530 ARF6P62330 175 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 DEFB112Q30KQ8 113 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 ZNF829Q3KNS6 432 aaPredicted RBP16.31■□□□□ 0.2
VCP-203ENST00000448530 C1orf146Q5VVC0 180 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 THAP5Q7Z6K1 395 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 ZDHHC13Q8IUH4 622 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 ZNF679Q8IYX0 411 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 OR10Z1Q8NGY1 313 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 SGMS2Q8NHU3 365 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 GATAD2BQ8WXI9 593 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 RPL3LQ92901 407 aaKnown RBP16.31■□□□□ 0.2
VCP-203ENST00000448530 HAO2Q9NYQ3 351 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 ENOPH1Q9UHY7 261 aa16.31■□□□□ 0.2
VCP-203ENST00000448530 CCDC182A6NF36 153 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 NKX6-3A6NJ46 265 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 HOXA3O43365 443 aaPredicted RBP16.3■□□□□ 0.2
VCP-203ENST00000448530 PRKYO43930 277 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 ATP6V1B1P15313 513 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 DCTDP32321 178 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 ACTR3P61158 418 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 ROM1Q03395 351 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 LRRC10Q5BKY1 277 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 RUSC1-AS1Q66K80 236 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 MEPCEQ7L2J0 689 aaKnown RBP16.3■□□□□ 0.2
VCP-203ENST00000448530 SCCPDHQ8NBX0 429 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 OR8B4Q96RC9 309 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 TBX15Q96SF7 602 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 CNTD2Q9H8S5 307 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 NOX4Q9NPH5 578 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 FAM206AQ9NX38 181 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 RPUSD1Q9UJJ7 312 aaKnown RBP16.3■□□□□ 0.2
VCP-203ENST00000448530 AP4S1Q9Y587 144 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 PCDHGB1Q9Y5G3 927 aa16.3■□□□□ 0.2
VCP-203ENST00000448530 SLC22A31A6NKX4 558 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.29■□□□□ 0.2
VCP-203ENST00000448530 GPR37O15354 613 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 MITFO75030 526 aaPredicted RBP16.29■□□□□ 0.2
VCP-203ENST00000448530 FCGR1AP12314 374 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 MMP9P14780 707 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 GPM6AP51674 278 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 IL13RA1P78552 427 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 IKZF1Q13422 519 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 C16orf87Q6PH81 154 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 CMTM4Q8IZR5 234 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 FAM216BQ8N7L0 139 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 TCEANCQ8N8B7 351 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 OR5T2Q8NGG2 359 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 LHX4Q969G2 390 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 SEH1LQ96EE3 360 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 FAM71F1Q96KD3 344 aaPredicted RBP16.29■□□□□ 0.2
VCP-203ENST00000448530 MNTQ99583 582 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 TTTY10Q9BZA0 68 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 PBOV1Q9GZY1 135 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 SIRPDQ9H106 197 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 ONECUT1Q9UBC0 465 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 GTF2A1LQ9UNN4 478 aa16.29■□□□□ 0.2
VCP-203ENST00000448530 CENPVL3A0A0U1RRI6 287 aa16.28■□□□□ 0.2
VCP-203ENST00000448530 AKR7A2O43488 359 aa16.28■□□□□ 0.2
VCP-203ENST00000448530 GNG3P63215 75 aa16.28■□□□□ 0.2
VCP-203ENST00000448530 ELF3P78545 371 aaPredicted RBP16.28■□□□□ 0.2
VCP-203ENST00000448530 RIPPLY1Q0D2K3 151 aa16.28■□□□□ 0.2
VCP-203ENST00000448530 CDONQ4KMG0 1287 aa16.28■□□□□ 0.2
VCP-203ENST00000448530 FAM76BQ5HYJ3 339 aa16.28■□□□□ 0.2
VCP-203ENST00000448530 SLX4IPQ5VYV7 408 aa16.28■□□□□ 0.2
VCP-203ENST00000448530 NXNL2Q5VZ03 156 aa16.28■□□□□ 0.2
VCP-203ENST00000448530 STUMQ69YW2 141 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms