RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 OR2W1Q9Y3N9 320 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 FZD9O00144 591 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 TBX18O95935 607 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 CSN3P07498 182 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 CPMP14384 443 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 NTSR1P30989 418 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 ARRDC1Q8N5I2 433 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 CELF2-AS1Q8N7Q2 184 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SLC52A3Q9NQ40 469 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 PSORS1C1Q9UIG5 152 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SALL3Q9BXA9 1300 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 NWD1Q149M9 1564 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 TNCP24821 2201 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 PRRG2O14669 202 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 LANCL1O43813 399 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SHC1P29353 583 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 FAM3BP58499 235 aaPredicted RBP8.12□□□□□ -1.11
NIPBL-202ENST00000448238 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.12□□□□□ -1.11
NIPBL-202ENST00000448238 PELI1Q96FA3 418 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SNX22Q96L94 193 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 HSD17B10Q99714 261 aaKnown RBP8.12□□□□□ -1.11
NIPBL-202ENST00000448238 PTPRUQ92729 1446 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 GPR25O00155 361 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 P2RY10O00398 339 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SOD1P00441 154 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 F7P08709 466 aaPredicted RBP8.12□□□□□ -1.11
NIPBL-202ENST00000448238 NAT2P11245 290 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 NID1P14543 1247 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 ARRB2P32121 409 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 GAMTQ14353 236 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SPANXN1Q5VSR9 72 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 LHX8Q68G74 356 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 GUCD1Q96NT3 240 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 MGST2Q99735 147 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF665Q9H7R5 613 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 WNT6Q9Y6F9 365 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 LEFTY2O00292 366 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 CDK2AP2O75956 126 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 GABRB1P18505 474 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SRSF5Q13243 272 aaKnown RBP8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SLC10A6Q3KNW5 377 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 FAM24BQ8N5W8 94 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SPPL3Q8TCT6 385 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 NEUROG1Q92886 237 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 MISP3Q96FF7 219 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SIGLEC10Q96LC7 697 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 IP6K3Q96PC2 410 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 GEMIN7Q9H840 131 aaKnown RBP8.12□□□□□ -1.11
NIPBL-202ENST00000448238 MUC4Q99102 2169 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 CRYAAP02489 173 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SLC25A11Q02978 314 aaKnown RBP8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 ZADH2Q8N4Q0 377 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 CHST6Q9GZX3 395 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 PRSS16Q9NQE7 514 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 IL36GQ9NZH8 169 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 COCHO43405 550 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 TMPRSS11DO60235 418 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SPINK4O60575 86 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 HRH1P35367 487 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 RAB38P57729 211 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 HYAL4Q2M3T9 481 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 LRRTM3Q86VH5 581 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 C20orf27Q9GZN8 174 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 HSD3B7Q9H2F3 369 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 MAP3K4Q9Y6R4 1608 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 A0A087WV62 115 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 PRRX1P54821 245 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 CST6Q15828 149 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 FAM78BQ5VT40 261 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 TRILQ7L0X0 811 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 MOB3BQ86TA1 216 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 RBKSQ9H477 322 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 SFXN1Q9H9B4 322 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 MSL2Q9HCI7 577 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 PRSS50Q9UI38 385 aa8.12□□□□□ -1.11
NIPBL-202ENST00000448238 MRPS2Q9Y399 296 aaKnown RBP8.12□□□□□ -1.11
NIPBL-202ENST00000448238 TMEM210A6NLX4 147 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 FNDC7Q5VTL7 733 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF788Q6ZQV5 615 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 RPS27LQ71UM5 84 aaKnown RBP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF441Q8N8Z8 693 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 WDR13Q9H1Z4 485 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TECRQ9NZ01 308 aaKnown RBP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-202ENST00000448238 HLA-GP17693 338 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TNFRSF1AP19438 455 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TAZQ16635 292 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 C6orf132Q5T0Z8 1188 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 C11orf87Q6NUJ2 197 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 SPNS3Q6ZMD2 512 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 CBLL1Q75N03 491 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 OR2K2Q8NGT1 345 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 ZG16BQ96DA0 208 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 TCRBV3S1A0A5B6 114 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 MGPP08493 103 aa8.11□□□□□ -1.11
NIPBL-202ENST00000448238 SMPD1P17405 629 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms