RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 NUP214P35658 2090 aaPredicted RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 CLDN15P56746 228 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 INSM1Q01101 510 aaPredicted RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 Q6ZNB5 142 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 ABI3BPQ7Z7G0 1075 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 DUSP18Q8NEJ0 188 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 KCNE4Q8WWG9 221 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 CCDC74AQ96AQ1 378 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 SPSB1Q96BD6 273 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 C4orf45Q96LM5 186 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 CCDC74BQ96LY2 380 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 MENTQ9BUN1 341 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 VAMP8Q9BV40 100 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 TEX101Q9BY14 249 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 A0A096LPE4 126 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 A0A1W2PPZ6 126 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 HMSDA8MTL9 139 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 PNPP00491 289 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 PGA3P0DJD8 388 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 RPL11P62913 178 aaKnown RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 PPP1R1AQ13522 171 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 WDR38Q5JTN6 314 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 HSD17B13Q7Z5P4 300 aaPredicted RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 C8orf44Q96CB5 159 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 ADGRG7Q96K78 797 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 TECTBQ96PL2 329 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 C1QTNF6Q9BXI9 259 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 MMP25Q9NPA2 562 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 LAMA4Q16363 1823 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 PTPRZ1P23471 2315 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 RP1P56715 2156 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 SERTM2A0A1B0GWG4 89 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 IGHA2P01877 340 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 ZBTB25P24278 435 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 F2RP25116 425 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 CD96P40200 585 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 CNN1P51911 297 aaKnown RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 PTTG1IPP53801 180 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 FOXF1Q12946 379 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 PRR27Q6MZM9 219 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 CD300LDQ6UXZ3 194 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 FBXL14Q8N1E6 418 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 UBAC2Q8NBM4 344 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 CPEB3Q8NE35 698 aaKnown RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 TMEM37Q8WXS4 190 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 SCMH1Q96GD3 660 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 SLC35B3Q9H1N7 401 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 PRDM7Q9NQW5 492 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 OR5V1Q9UGF6 321 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 PMS2P1A4D2B8 440 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 SFT2D2O95562 160 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 MPC2O95563 127 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 CRYAAP02489 173 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 B4GALT1P15291 398 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 PAX6P26367 422 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 CCR5P51681 352 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 MVDP53602 400 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 SP6Q3SY56 376 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 TOMM20LQ6UXN7 152 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 Q7L0L9 218 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 DEFB108BQ8NET1 73 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 NOXO1Q8NFA2 376 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 OR10X1Q8NGY0 326 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 AKR7LQ8NHP1 331 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 EXTL1Q92935 676 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 ST6GAL2Q96JF0 529 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 EXOGQ9Y2C4 368 aaKnown RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 KLF13Q9Y2Y9 288 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 LOXHD1Q8IVV2 1947 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 DDX60Q8IY21 1712 aaKnown RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 UBE2L5PA0A1B0GUS4 154 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 NKX2-2O95096 273 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 HIST1H1DP16402 221 aaKnown RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 CCL11P51671 97 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 ERVFC1-1P60608 527 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 DUSP2Q05923 314 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 C19orf35Q6ZS72 473 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 KTI12Q96EK9 354 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-204ENST00000448183 PARD6AQ9NPB6 346 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
NEDD9-204ENST00000448183 CXorf51AA0A1B0GTR3 108 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 RGS13O14921 159 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 SPRY1O43609 319 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 SLC6A1P30531 599 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 SLC37A1P57057 533 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 PPP2CBP62714 309 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 PPP2CAP67775 309 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 CD300CQ08708 224 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 INSL4Q14641 139 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 MRM1Q6IN84 353 aaKnown RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 DEGS2Q6QHC5 323 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 C6orf15Q6UXA7 325 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 ZADH2Q8N4Q0 377 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 FAM24BQ8N5W8 94 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 NHLRC2Q8NBF2 726 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 ROBO4Q8WZ75 1007 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 MRPS24Q96EL2 167 aaKnown RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 BARX1Q9HBU1 254 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 RASL12Q9NYN1 266 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms