RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZNF774Q6NX45 483 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 TMEM184AQ6ZMB5 413 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 PLPP7Q8NBV4 271 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 FAM46BQ96A09 425 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 SRP19P09132 144 aaKnown RBP17.04■□□□□ 0.32
HMGA1-205ENST00000447654 ALOX5APP20292 161 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 GNALP38405 381 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 INSM1Q01101 510 aaPredicted RBP17.04■□□□□ 0.32
HMGA1-205ENST00000447654 PAX5Q02548 391 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 EXOSC6Q5RKV6 272 aaKnown RBP17.04■□□□□ 0.32
HMGA1-205ENST00000447654 ABHD17CQ6PCB6 329 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 BTNL3Q6UXE8 466 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 OR10G4Q8NGN3 311 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 OR13C9Q8NGT0 318 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 GRHL3Q8TE85 626 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 SNX22Q96L94 193 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 ANGPTL4Q9BY76 406 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 PCED1AQ9H1Q7 454 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 S1PR5Q9H228 398 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 KIAA1456Q9P272 454 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 DHDHQ9UQ10 334 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 GAB2Q9UQC2 676 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 A0A1W2PPQ1 181 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 SOX15O60248 233 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 NSA2O95478 260 aaKnown RBP17.03■□□□□ 0.32
HMGA1-205ENST00000447654 NGFRP08138 427 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 PDLIM4P50479 330 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 SUPT4H1P63272 117 aaKnown RBP17.03■□□□□ 0.32
HMGA1-205ENST00000447654 CSNK1G2P78368 415 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 PNRC1Q12796 327 aaPredicted RBP17.03■□□□□ 0.32
HMGA1-205ENST00000447654 SLC9A3R2Q15599 337 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 ARSJQ5FYB0 599 aaPredicted RBP17.03■□□□□ 0.32
HMGA1-205ENST00000447654 WDR38Q5JTN6 314 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 DCST2Q5T1A1 773 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 GPR157Q5UAW9 335 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 FBXW9Q5XUX1 488 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 FOXRED2Q8IWF2 684 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 NKAIN3Q8N8D7 197 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 RHBDD1Q8TEB9 315 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 ACY3Q96HD9 319 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 FLRT3Q9NZU0 649 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 MRPS18BQ9Y676 258 aaKnown RBP17.03■□□□□ 0.32
HMGA1-205ENST00000447654 URGCP-MRPS24S4R325 110 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 KNL1Q8NG31 2342 aa17.03■□□□□ 0.32
HMGA1-205ENST00000447654 A0A1W2PQF6 199 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 PRR19A6NJB7 356 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 C4orf51C9J302 202 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 K7N7A8 449 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 MASP2O00187 686 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 PGA4P0DJD7 388 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 PGA5P0DJD9 388 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 RIPPLY2Q5TAB7 128 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 FCRL6Q6DN72 434 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 ASPHD2Q6ICH7 369 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 OR10A7Q8NGE5 316 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 OR2A1Q8NGT9 310 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 ZPLD1Q8TCW7 415 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 C22orf15Q8WYQ4 148 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 DNASE2BQ8WZ79 361 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 CMKLR1Q99788 373 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 ZPBPQ9BS86 351 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 G6PC3Q9BUM1 346 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 ZMAT3Q9HA38 289 aaKnown RBP17.02■□□□□ 0.32
HMGA1-205ENST00000447654 LAMA1P25391 3075 aa17.02■□□□□ 0.32
HMGA1-205ENST00000447654 TRBV23OR9-2A0A075B6M9 112 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 A0A1B0GTH9 108 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 SYNDIG1LA6NDD5 238 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 CLDN34H7C241 214 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 SLC31A1O15431 190 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 CST2P09228 141 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 RPS4XP62701 263 aaKnown RBP17.02■□□□□ 0.31
HMGA1-205ENST00000447654 ALG10BQ5I7T1 473 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 ZNF776Q68DI1 518 aaPredicted RBP17.02■□□□□ 0.31
HMGA1-205ENST00000447654 APCDD1LQ8NCL9 501 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 NOXO1Q8NFA2 376 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 JSRP1Q96MG2 331 aaPredicted RBP17.02■□□□□ 0.31
HMGA1-205ENST00000447654 PARP12Q9H0J9 701 aaKnown RBP17.02■□□□□ 0.31
HMGA1-205ENST00000447654 GSKIPQ9P0R6 139 aa17.02■□□□□ 0.31
HMGA1-205ENST00000447654 E5RGE8 158 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 PLRG1O43660 514 aaKnown RBP17.01■□□□□ 0.31
HMGA1-205ENST00000447654 EML2O95834 649 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 OPN1MWP04001 364 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 THEGLP0DJG4 465 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 OPN1MW2P0DN77 364 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 OPN1MW3P0DN78 364 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 RAP1BP61224 184 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 RPS21P63220 83 aaKnown RBP17.01■□□□□ 0.31
HMGA1-205ENST00000447654 TMEM176BQ3YBM2 270 aaPredicted RBP17.01■□□□□ 0.31
HMGA1-205ENST00000447654 GXYLT1Q4G148 440 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 DMRTA1Q5VZB9 504 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 ULK3Q6PHR2 472 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 LRRC25Q8N386 305 aaPredicted RBP17.01■□□□□ 0.31
HMGA1-205ENST00000447654 GVQW1Q8N7I0 195 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 OR52N4Q8NGI2 321 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 HLA-CQ95604 372 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 TMEM18Q96B42 140 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 ULBP3Q9BZM4 244 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 FGF22Q9HCT0 170 aa17.01■□□□□ 0.31
HMGA1-205ENST00000447654 PHPT1Q9NRX4 125 aaPredicted RBP17.01■□□□□ 0.31
HMGA1-205ENST00000447654 CBLN4Q9NTU7 201 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms