RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 DGCR2P98153 550 aa11.17□□□□□ -0.62
LINC00642-202ENST00000442515 SLC36A3Q495N2 470 aa11.17□□□□□ -0.62
LINC00642-202ENST00000442515 DRAM2Q6UX65 266 aa11.17□□□□□ -0.62
LINC00642-202ENST00000442515 CENPVQ7Z7K6 275 aaPredicted RBP11.17□□□□□ -0.62
LINC00642-202ENST00000442515 TMEM185AQ8NFB2 350 aa11.17□□□□□ -0.62
LINC00642-202ENST00000442515 OR4X2Q8NGF9 303 aa11.17□□□□□ -0.62
LINC00642-202ENST00000442515 OR5K1Q8NHB7 308 aa11.17□□□□□ -0.62
LINC00642-202ENST00000442515 FAM46AQ96IP4 442 aaKnown RBP11.17□□□□□ -0.62
LINC00642-202ENST00000442515 PPP1R3EQ9H7J1 279 aa11.17□□□□□ -0.62
LINC00642-202ENST00000442515 SRA1Q9HD15 236 aaKnown RBP11.17□□□□□ -0.62
LINC00642-202ENST00000442515 SIGLEC7Q9Y286 467 aa11.17□□□□□ -0.62
LINC00642-202ENST00000442515 LSM4Q9Y4Z0 139 aaKnown RBP11.17□□□□□ -0.62
LINC00642-202ENST00000442515 PCLOQ9Y6V0 5065 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 IFNW1P05000 195 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 TROVE2P10155 538 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC00642-202ENST00000442515 DDOSTP39656 456 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 RPS27P42677 84 aaKnown RBP11.16□□□□□ -0.62
LINC00642-202ENST00000442515 RPS6KA3P51812 740 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 GYS2P54840 703 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 ERVFRD-1P60508 538 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 SPIBQ01892 262 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 DPY19L2P2Q6ZN68 376 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 C11orf42Q8N5U0 333 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 ZNRF1Q8ND25 227 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 Q8NFD4 153 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 OR10Z1Q8NGY1 313 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 TFAP2CQ92754 450 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 SPSB4Q96A44 273 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 FOXRED1Q96CU9 486 aaPredicted RBP11.16□□□□□ -0.62
LINC00642-202ENST00000442515 NMNAT3Q96T66 252 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 MCRIP2Q9BUT9 160 aaKnown RBP11.16□□□□□ -0.62
LINC00642-202ENST00000442515 RABEP2Q9H5N1 569 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 RPRD1BQ9NQG5 326 aaKnown RBP11.16□□□□□ -0.62
LINC00642-202ENST00000442515 MRPL22Q9NWU5 206 aaKnown RBP11.16□□□□□ -0.62
LINC00642-202ENST00000442515 NLKQ9UBE8 527 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 TMEM5Q9Y2B1 443 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 N6AMT1Q9Y5N5 214 aa11.16□□□□□ -0.62
LINC00642-202ENST00000442515 IGKV1D-17A0A075B6S4 117 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 OR2AT4A6NND4 320 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 AKR7A2O43488 359 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 XRCC2O43543 280 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 HLA-DQA2P01906 255 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 LYL1P12980 280 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 GNALP38405 381 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 GABRA2P47869 451 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 FAM3AP98173 230 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 IL5RAQ01344 420 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 SSX2Q16385 188 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 LDLRAD2Q5SZI1 272 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 NANOGP8Q6NSW7 305 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
LINC00642-202ENST00000442515 SLC16A9Q7RTY1 509 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 ZBTB46Q86UZ6 589 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 CYB561A3Q8NBI2 242 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 RPL3LQ92901 407 aaKnown RBP11.15□□□□□ -0.62
LINC00642-202ENST00000442515 RSRC1Q96IZ7 334 aaKnown RBP11.15□□□□□ -0.62
LINC00642-202ENST00000442515 C7orf26Q96N11 449 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 ZNF649Q9BS31 505 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 COPS4Q9BT78 406 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 NKIRAS1Q9NYS0 192 aa11.15□□□□□ -0.62
LINC00642-202ENST00000442515 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.62
LINC00642-202ENST00000442515 RYR1P21817 5038 aa11.15□□□□□ -0.63
LINC00642-202ENST00000442515 RHBDL1O75783 438 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 RENP00797 406 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 CCL3L1P16619 93 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 JUNBP17275 347 aaPredicted RBP11.14□□□□□ -0.63
LINC00642-202ENST00000442515 PRKXP51817 358 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 SLC7A2P52569 658 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 SLC25A1P53007 311 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 SELENOWP63302 87 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 ERICH5Q6P6B1 374 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 UNQ9370/PRO34162Q6UXP9 181 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 RRM2BQ7LG56 351 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 VTCN1Q7Z7D3 282 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 MALSU1Q96EH3 234 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 MICU1Q9BPX6 476 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 PAPOLGQ9BWT3 736 aaKnown RBP11.14□□□□□ -0.63
LINC00642-202ENST00000442515 NSRP1Q9H0G5 558 aaKnown RBP11.14□□□□□ -0.63
LINC00642-202ENST00000442515 FN3KQ9H479 309 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 PALMDQ9NP74 551 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 INTS9Q9NV88 658 aaKnown RBP11.14□□□□□ -0.63
LINC00642-202ENST00000442515 ZNF222Q9UK12 451 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 RHBDD3Q9Y3P4 386 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 TBL2Q9Y4P3 447 aaKnown RBP11.14□□□□□ -0.63
LINC00642-202ENST00000442515 LRP12Q9Y561 859 aa11.14□□□□□ -0.63
LINC00642-202ENST00000442515 A0A1W2PPH5 198 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 ODF3BA8MYP8 253 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 ARG1P05089 322 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 PSKH1P11801 424 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 KDELR2P33947 212 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 DYNLT3P51808 116 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 CAPZA1P52907 286 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 RPL31P62899 125 aaKnown RBP11.13□□□□□ -0.63
LINC00642-202ENST00000442515 GNGT1P63211 74 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 CPLX4Q7Z7G2 160 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 ZDHHC21Q8IVQ6 265 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 OR51D1Q8NGF3 324 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 OR4C15Q8NGM1 316 aa11.13□□□□□ -0.63
LINC00642-202ENST00000442515 LYZL4Q96KX0 146 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms