RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SLC47A2Q86VL8 602 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 APRG1Q8IVJ8 170 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 SMIM20Q8N5G0 67 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR6N2Q8NGY6 317 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 GRPEL2Q8TAA5 225 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 PLPPR1Q8TBJ4 325 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 RNF138Q8WVD3 245 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 CRYGNQ8WXF5 182 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 RORBQ92753 470 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 CNN2Q99439 309 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 PHB2Q99623 299 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 VPS25Q9BRG1 176 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 UGT2B28Q9BY64 529 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 MRPS26Q9BYN8 205 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 NMNAT1Q9HAN9 279 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF223Q9UK11 482 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 KCNIP3Q9Y2W7 256 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 PEX16Q9Y5Y5 336 aa3.31□□□□□ -1.88
CDC42BPA-207ENST00000441725 IGHV2-70DA0A0C4DH43 119 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 CCDC160A6NGH7 325 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 SMIM9A6NGZ8 99 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 FTCDNL1E5RQL4 147 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 G3V2T6 193 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 PLIN3O60664 434 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 SULT1C4O75897 302 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZFAND5O76080 213 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 HLA-HP01893 362 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF806P0C7X5 589 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 LIPCP11150 499 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 DPEP1P16444 411 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 RPS12P25398 132 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 PSMA1P25786 263 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 FMO3P31513 532 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 CD200P41217 278 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 RPS9P46781 194 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 DNASE1L1P49184 302 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 RAB7AP51149 207 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 SIX1Q15475 284 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF77Q15935 545 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZBED5Q49AG3 693 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 STUMQ69YW2 141 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF589Q86UQ0 364 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 MARCH9Q86YJ5 346 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 BLIDQ8IZY5 108 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 C4orf33Q8N1A6 199 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 SVOPLQ8N434 492 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR4F15Q8NGB8 312 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR4K15Q8NH41 348 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 GPR151Q8TDV0 419 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR5P2Q8WZ92 322 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 UBE2E3Q969T4 207 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 CENPNQ96H22 339 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR10C1Q96KK4 312 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 ATP5SQ99766 215 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 EBF4Q9BQW3 602 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 MED18Q9BUE0 208 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 MIXL1Q9H2W2 232 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 SDF2L1Q9HCN8 221 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 PAK1IP1Q9NWT1 392 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 WRAP73Q9P2S5 460 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 CACNG5Q9UF02 275 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 HHLA2Q9UM44 414 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 NEU3Q9UQ49 428 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 C14orf166Q9Y224 244 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 YARS2Q9Y2Z4 477 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 CEP162Q5TB80 1403 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 ATP7AQ04656 1500 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 MYH10P35580 1976 aa3.3□□□□□ -1.88
CDC42BPA-207ENST00000441725 TGIF2-C20orf24A0A0A6YYL0 155 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 TRBV9A0A0B4J1U6 114 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC22A20A6NK97 555 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM25AB3EWG3 89 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM25CB3EWG5 89 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM25GB3EWG6 89 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 KCNK1O00180 336 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 PHYHO14832 338 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 RGS5O15539 181 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 RAD51CO43502 376 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 MPZL2O60487 215 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 HSBP1O75506 76 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 VENTXO95231 258 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ATP6V1G2O95670 118 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 GPR75O95800 540 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 IGLV2-11P01706 119 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 RHOCP08134 193 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 PVRP15151 417 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 UGT2B7P16662 529 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 GDF1P27539 372 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 HTR1FP30939 366 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR10A3P58181 314 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 CDC42P60953 191 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 RND3P61587 244 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 MS4A2Q01362 244 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 MAPK14Q16539 360 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ACTL10Q5JWF8 245 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 PPM1LQ5SGD2 360 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 RESP18Q5W5W9 173 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 LEMD1Q68G75 181 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms