RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TMEM89A2RUT3 159 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 CCDC182A6NF36 153 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 NKX6-3A6NJ46 265 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 SLC22A31A6NKX4 558 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 M0R129 80 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 DVL1O14640 695 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 MITFO75030 526 aaPredicted RBP16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 TOX4O94842 621 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 ACKR3P25106 362 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 MAP2K3P46734 347 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 TEX36Q5VZQ5 186 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 DEGS2Q6QHC5 323 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 BRD3OSQ6XYD6 125 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 DACT3Q96B18 629 aaPredicted RBP16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 RASSF4Q9H2L5 321 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 PPP1R3EQ9H7J1 279 aa16.49■□□□□ 0.23
SHROOM1-204ENST00000440118 ZNF816-ZNF321PA0A0X1KG74 233 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 ZNF879B4DU55 563 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 ZNF254O75437 659 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 PLATP00750 562 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 CST4P01036 141 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 LHBP01229 141 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 CFHR2P36980 270 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 COMPP49747 757 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 WDR38Q5JTN6 314 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 MEPCEQ7L2J0 689 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 AMIGO2Q86SJ2 522 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 ZNF679Q8IYX0 411 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 OR5P3Q8WZ94 311 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 RPL3LQ92901 407 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 FAM71F1Q96KD3 344 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 LYZL4Q96KX0 146 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 ZNF48Q96MX3 618 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 OR8B4Q96RC9 309 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 CCL13Q99616 98 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 PBOV1Q9GZY1 135 aa16.48■□□□□ 0.23
SHROOM1-204ENST00000440118 ACOD1A6NK06 481 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 ZNF670-ZNF695F2Z2N8 137 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 P2RY10O00398 339 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 ECDO95905 644 aaPredicted RBP16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 SFTPBP07988 381 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 ACTR3P61158 418 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 IKZF1Q13422 519 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 SLX4IPQ5VYV7 408 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 NXNL2Q5VZ03 156 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 C9orf139Q6ZV77 190 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 BTN2A1Q7KYR7 527 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 BCDIN3DQ7Z5W3 292 aaKnown RBP16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 GID4Q8IVV7 300 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 C11orf53Q8IXP5 236 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 SLC35F2Q8IXU6 374 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 TMEM163Q8TC26 289 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 C12orf43Q96C57 262 aaKnown RBP16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 IL4I1Q96RQ9 567 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 GABARAPL1Q9H0R8 117 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 SEMA6AQ9H2E6 1030 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 GPR84Q9NQS5 396 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 FAM206AQ9NX38 181 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 COPS3Q9UNS2 423 aa16.47■□□□□ 0.23
SHROOM1-204ENST00000440118 A0A0U1RQV5 110 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 MDFIC2A0A1B0GVS7 189 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 SRRM5B3KS81 715 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 LOC110117498-PIK3R3F6TDL0 507 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 NDUFB3O43676 98 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 GPM6AP51674 278 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 CXCR4P61073 352 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 FOXL1Q12952 345 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 AWAT1Q58HT5 328 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 LRRC10Q5BKY1 277 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 CEP78Q5JTW2 689 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 BCL2L15Q5TBC7 163 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 PLCXD3Q63HM9 321 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 KDM4DQ6B0I6 523 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 ZNF322Q6U7Q0 402 aaPredicted RBP16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 FAM216BQ8N7L0 139 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 SCCPDHQ8NBX0 429 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 OR10Z1Q8NGY1 313 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 OR51E1Q8TCB6 317 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 LRTOMTQ8WZ04 291 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 WDFY2Q96P53 400 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 TLNRD1Q9H1K6 362 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 RIBC2Q9H4K1 309 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 MOB1AQ9H8S9 216 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 SNTG1Q9NSN8 517 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 ONECUT1Q9UBC0 465 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 KAAG1Q9UBP8 84 aa16.46■□□□□ 0.23
SHROOM1-204ENST00000440118 ZAR1LA6NP61 321 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 MTRF1O75570 445 aaKnown RBP16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 RNASE1P07998 156 aaKnown RBP16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 BPIFB3P59826 476 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 ROM1Q03395 351 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 RIPPLY1Q0D2K3 151 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 RUSC1-AS1Q66K80 236 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 OR5T2Q8NGG2 359 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 HPSE2Q8WWQ2 592 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 GATAD2BQ8WXI9 593 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 H1FXQ92522 213 aaKnown RBP16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 SEH1LQ96EE3 360 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 MNTQ99583 582 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 CIB1Q99828 191 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms