RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CNTD2Q9H8S5 307 aa15.59■□□□□ 0.09
CCDC78-204ENST00000439619 SMURF1Q9HCE7 757 aa15.59■□□□□ 0.09
CCDC78-204ENST00000439619 H2AFY2Q9P0M6 372 aaPredicted RBP15.59■□□□□ 0.09
CCDC78-204ENST00000439619 ZNF319Q9P2F9 582 aa15.59■□□□□ 0.09
CCDC78-204ENST00000439619 LRP12Q9Y561 859 aa15.59■□□□□ 0.09
CCDC78-204ENST00000439619 ARHGAP32A7KAX9 2087 aa15.58■□□□□ 0.09
CCDC78-204ENST00000439619 TMEM269A0A1B0GVZ9 245 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 NKX6-3A6NJ46 265 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 SRRM5B3KS81 715 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 GSC2O15499 205 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 ZNF254O75437 659 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 SFTPBP07988 381 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 ACTR3P61158 418 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 ARF6P62330 175 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 ESRRGP62508 458 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 POU4F2Q12837 409 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 WDR38Q5JTN6 314 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 THAP5Q7Z6K1 395 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 WDR86Q86TI4 376 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 C11orf53Q8IXP5 236 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 SCCPDHQ8NBX0 429 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 BBS1Q8NFJ9 593 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 OR5P3Q8WZ94 311 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 DMRTB1Q96MA1 342 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 TEAD3Q99594 435 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 CCL13Q99616 98 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 PKP2Q99959 881 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 DNTTIP1Q9H147 329 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 PRDM13Q9H4Q3 707 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 ENOPH1Q9UHY7 261 aa15.58■□□□□ 0.08
CCDC78-204ENST00000439619 RPUSD1Q9UJJ7 312 aaKnown RBP15.58■□□□□ 0.08
CCDC78-204ENST00000439619 ZNF816-ZNF321PA0A0X1KG74 233 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 A0A1B0GVI7 797 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 ATP6V1B1P15313 513 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 SLC2A5P22732 501 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 DCTDP32321 178 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 ZNF829Q3KNS6 432 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-204ENST00000439619 CDONQ4KMG0 1287 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 TMEM86BQ8N661 226 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 OR8B12Q8NGG6 310 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 OR5K1Q8NHB7 308 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 TBC1D15Q8TC07 691 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 LHX4Q969G2 390 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 SLC7A6OSQ96CW6 309 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-204ENST00000439619 MED30Q96HR3 178 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 ACOXLQ9NUZ1 547 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 HAO2Q9NYQ3 351 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 KPTNQ9Y664 436 aa15.57■□□□□ 0.08
CCDC78-204ENST00000439619 A0A0U1RQV5 110 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 CENPVL3A0A0U1RRI6 287 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 A0A1B0GUS0 222 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 MDFIC2A0A1B0GVS7 189 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 MMP9P14780 707 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 ACKR3P25106 362 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 RIDAP52758 137 aaKnown RBP15.56■□□□□ 0.08
CCDC78-204ENST00000439619 IKZF1Q13422 519 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 PTGES3Q15185 160 aaKnown RBP15.56■□□□□ 0.08
CCDC78-204ENST00000439619 FAHD1Q6P587 224 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 Q6YL49 198 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 ZNF679Q8IYX0 411 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 RPL3LQ92901 407 aaKnown RBP15.56■□□□□ 0.08
CCDC78-204ENST00000439619 TBX15Q96SF7 602 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 CNN2Q99439 309 aaKnown RBP15.56■□□□□ 0.08
CCDC78-204ENST00000439619 SIRPDQ9H106 197 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 UNKLQ9H9P5 680 aaKnown RBP15.56■□□□□ 0.08
CCDC78-204ENST00000439619 KRT84Q9NSB2 600 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 ONECUT1Q9UBC0 465 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 IKZF2Q9UKS7 526 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 KLHDC2Q9Y2U9 406 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 CAB39Q9Y376 341 aaPredicted RBP15.56■□□□□ 0.08
CCDC78-204ENST00000439619 SOX21Q9Y651 276 aaPredicted RBP15.56■□□□□ 0.08
CCDC78-204ENST00000439619 POMT1Q9Y6A1 747 aa15.56■□□□□ 0.08
CCDC78-204ENST00000439619 IGHV1-69DA0A0B4J2H0 117 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 SLC22A31A6NKX4 558 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 G3V2T6 193 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 MTRF1O75570 445 aaKnown RBP15.55■□□□□ 0.08
CCDC78-204ENST00000439619 IGHV1-69P01742 117 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 MRPL3P09001 348 aaKnown RBP15.55■□□□□ 0.08
CCDC78-204ENST00000439619 GMFBP60983 142 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 GNG3P63215 75 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 ROM1Q03395 351 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 RIPPLY1Q0D2K3 151 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 FAM76BQ5HYJ3 339 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 ATPAF1Q5TC12 328 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-204ENST00000439619 RUSC1-AS1Q66K80 236 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 ZNF671Q8TAW3 534 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 SSMEM1Q8WWF3 244 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 TMIGD2Q96BF3 282 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 LYZL4Q96KX0 146 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 MNTQ99583 582 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 TNFRSF19Q9NS68 423 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 FAM96BQ9Y3D0 163 aa15.55■□□□□ 0.08
CCDC78-204ENST00000439619 ATP5HO75947 161 aa15.54■□□□□ 0.08
CCDC78-204ENST00000439619 DAPP51397 102 aa15.54■□□□□ 0.08
CCDC78-204ENST00000439619 GPM6AP51674 278 aa15.54■□□□□ 0.08
CCDC78-204ENST00000439619 HCCSP53701 268 aa15.54■□□□□ 0.08
CCDC78-204ENST00000439619 GUCA2AQ02747 115 aa15.54■□□□□ 0.08
CCDC78-204ENST00000439619 CEACAM21Q3KPI0 293 aa15.54■□□□□ 0.08
CCDC78-204ENST00000439619 ZBTB37Q5TC79 503 aa15.54■□□□□ 0.08
CCDC78-204ENST00000439619 STUMQ69YW2 141 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms