RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 Q7L0L9 218 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 PFN4Q8NHR9 129 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 MYOZ3Q8TDC0 251 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 HDAC8Q9BY41 377 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 HAPLN2Q9GZV7 340 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 ARID1AO14497 2285 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 SLC17A2O00624 439 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 GPANK1O95872 356 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 RPS4Y1P22090 263 aaKnown RBP10.45□□□□□ -0.74
PTCH1-209ENST00000437951 DCTDP32321 178 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 P2RY2P41231 377 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 BTG2P78543 158 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 DUSP5Q16690 384 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 KHDC3LQ587J8 217 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 OR2B11Q5JQS5 317 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 SLCO4C1Q6ZQN7 724 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 SCCPDHQ8NBX0 429 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 TMEM230Q96A57 120 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 DOK1Q99704 481 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 UTP23Q9BRU9 249 aaKnown RBP10.45□□□□□ -0.74
PTCH1-209ENST00000437951 SLC46A2Q9BY10 475 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 CD207Q9UJ71 328 aa10.45□□□□□ -0.74
PTCH1-209ENST00000437951 MRPS16Q9Y3D3 137 aaKnown RBP10.45□□□□□ -0.74
PTCH1-209ENST00000437951 CTDSPLO15194 276 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 PPM1DO15297 605 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SPNP16150 400 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 NPY1RP25929 384 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 ERVFRD-1P60508 538 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 LGALSLQ3ZCW2 172 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-209ENST00000437951 C9orf152Q5JTZ5 239 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 PLPP6Q8IY26 295 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 PIANPQ8IYJ0 282 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SFT2D2O95562 160 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 MPC2O95563 127 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 CRHP06850 196 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 BRS3P32247 399 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 CD70P32970 193 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 FUT6P51993 359 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 YPEL5P62699 121 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 CD226Q15762 336 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 OSR2Q8N2R0 312 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 RAB37Q96AX2 223 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SNX22Q96L94 193 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-209ENST00000437951 VAX2Q9UIW0 290 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 P2RY1P47900 373 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SMIM21Q3B7S5 101 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 ZNF511Q8NB15 262 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 LILRB1Q8NHL6 650 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-209ENST00000437951 PIPOXQ9P0Z9 390 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 THBS4P35443 961 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 HNRNPA1L2Q32P51 320 aaKnown RBP10.44□□□□□ -0.74
PTCH1-209ENST00000437951 FAM71E1Q6IPT2 247 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 RIMKLAQ8IXN7 391 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 DUSP18Q8NEJ0 188 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 PERPQ96FX8 193 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SLIRPQ9GZT3 109 aaKnown RBP10.44□□□□□ -0.74
PTCH1-209ENST00000437951 IL23AQ9NPF7 189 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 PRSS50Q9UI38 385 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 HEPACAM2A8MVW5 462 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 HCRTO43612 131 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 CA2P00918 260 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SLC25A5P05141 298 aaKnown RBP10.44□□□□□ -0.74
PTCH1-209ENST00000437951 HLA-GP17693 338 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SLC38A11Q08AI6 406 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 DEFB110Q30KQ9 67 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 FAM209BQ5JX69 171 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SEZ6L2Q6UXD5 910 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 C11orf40Q8WZ69 217 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 RASL12Q9NYN1 266 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 DOCK10Q96BY6 2186 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 G3V3Y1 287 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 CRYBA1P05813 215 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 RUNX3Q13761 415 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 C1QTNF12Q5T7M4 302 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 AFMIDQ63HM1 303 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 C17orf78Q8N4C9 275 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SLC25A33Q9BSK2 321 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 COA3Q9Y2R0 106 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-209ENST00000437951 OR5AC1P0C628 307 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 SLC19A1P41440 591 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 ZNF345Q14585 488 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 C1orf220Q5T0J3 134 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 ZDHHC23Q8IYP9 409 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 OR5M1Q8NGP8 315 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 OR1L6Q8NGR2 347 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 PDXPQ96GD0 296 aa10.44□□□□□ -0.74
PTCH1-209ENST00000437951 ZNF716A6NP11 495 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 ZNF253O75346 499 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 EDDM3AQ14507 147 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 ARIH2OSQ8N7S6 290 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 ACY3Q96HD9 319 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 HES7Q9BYE0 225 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 A0A1W2PN81 502 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 C9orf170A2RU37 121 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 DIRC3C9JPN6 131 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 ACTL6AO96019 429 aa10.43□□□□□ -0.74
PTCH1-209ENST00000437951 CHRNA7P36544 502 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms