RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FBXO17Q96EF6 278 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 MFRPQ9BY79 579 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 TMPRSS13Q9BYE2 586 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 ZNF275Q9NSD4 429 aaPredicted RBP13.73□□□□□ -0.21
SCARF1-203ENST00000434376 GSKIPQ9P0R6 139 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 SHPKQ9UHJ6 478 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 CSF1P09603 554 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 TMEM225BP0DP42 221 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 VSIG8P0DPA2 414 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 FCGR2AP12318 317 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 SLC23A3Q6PIS1 610 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 NAXDQ8IW45 347 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 LILRB1Q8NHL6 650 aaPredicted RBP13.73□□□□□ -0.21
SCARF1-203ENST00000434376 NANPQ8TBE9 248 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 PPP1R1CQ8WVI7 109 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 THOC3Q96J01 351 aaKnown RBP13.73□□□□□ -0.21
SCARF1-203ENST00000434376 HDHD3Q9BSH5 251 aaPredicted RBP13.73□□□□□ -0.21
SCARF1-203ENST00000434376 PCED1AQ9H1Q7 454 aa13.73□□□□□ -0.21
SCARF1-203ENST00000434376 RD3LP0DJH9 198 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 OPRM1P35372 400 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 RGS19P49795 217 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 SLC36A1Q7Z2H8 476 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 MISPQ8IVT2 679 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 CCDC36Q8IYA8 594 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 GTPBP8Q8N3Z3 284 aaPredicted RBP13.72□□□□□ -0.21
SCARF1-203ENST00000434376 OR51T1Q8NGJ9 327 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 SRXN1Q9BYN0 137 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 HRH4Q9H3N8 390 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 FAM96BQ9Y3D0 163 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 MEX3AA1L020 520 aaKnown RBP13.72□□□□□ -0.21
SCARF1-203ENST00000434376 ZNF878C9JN71 531 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 RBMXP38159 391 aaKnown RBP13.72□□□□□ -0.21
SCARF1-203ENST00000434376 UNC119Q13432 240 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 ZNF774Q6NX45 483 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 OPN5Q6U736 354 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 SLC16A13Q7RTY0 426 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 MARCH1Q8TCQ1 289 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 TMED6Q8WW62 240 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 CCNL2Q96S94 520 aaPredicted RBP13.72□□□□□ -0.21
SCARF1-203ENST00000434376 IFT22Q9H7X7 185 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 UBBP0CG47 229 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 UBCP0CG48 685 aaKnown RBP13.72□□□□□ -0.21
SCARF1-203ENST00000434376 PGA4P0DJD7 388 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 PGA3P0DJD8 388 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 COX6A1P12074 109 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 NFYBP25208 207 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 RPS27AP62979 156 aaKnown RBP13.72□□□□□ -0.21
SCARF1-203ENST00000434376 UBA52P62987 128 aaKnown RBP13.72□□□□□ -0.21
SCARF1-203ENST00000434376 SNTB1Q13884 538 aaKnown RBP13.72□□□□□ -0.21
SCARF1-203ENST00000434376 TEX30Q5JUR7 227 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 CCDC107Q8WV48 283 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 RNF133Q8WVZ7 376 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 PRRG4Q9BZD6 226 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 TGIF2Q9GZN2 237 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 CALHM2Q9HA72 323 aa13.72□□□□□ -0.21
SCARF1-203ENST00000434376 IGHV1-45A0A0A0MS14 117 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 ARPC4-TTLL3A0A0A6YYG9 625 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 SULT1B1O43704 296 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 ITGB2P05107 769 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 MPGP29372 298 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 IKZF1Q13422 519 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 ZNF385CQ66K41 422 aaPredicted RBP13.71□□□□□ -0.21
SCARF1-203ENST00000434376 MRPL14Q6P1L8 145 aaKnown RBP13.71□□□□□ -0.21
SCARF1-203ENST00000434376 LDLRAD3Q86YD5 345 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 OR6K3Q8NGY3 331 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 PHYHIPQ92561 330 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 ARHGAP5-AS1Q96IT6 56 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 PURGQ9UJV8 347 aaKnown RBP13.71□□□□□ -0.21
SCARF1-203ENST00000434376 PIGLQ9Y2B2 252 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 A0A1W2PR80 420 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 RFPL4AA6NLU0 287 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 RFPL4AL1F8VTS6 287 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 MGMTP16455 207 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 MRPS10P82664 201 aaKnown RBP13.71□□□□□ -0.21
SCARF1-203ENST00000434376 C5orf24Q7Z6I8 188 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 IL22RA1Q8N6P7 574 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 ZBTB8AQ96BR9 441 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 SLC25A32Q9H2D1 315 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 FAM206AQ9NX38 181 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 P4HTMQ9NXG6 502 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 ETV7Q9Y603 341 aa13.71□□□□□ -0.21
SCARF1-203ENST00000434376 TRAV14DV4A0A0A6YYC5 116 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 SGCEO43556 437 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 NDUFA2O43678 99 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 MPLP40238 635 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 SRSF3P84103 164 aaKnown RBP13.7□□□□□ -0.22
SCARF1-203ENST00000434376 DHODHQ02127 395 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 ROM1Q03395 351 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 TAF9Q16594 264 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 THEM4Q5T1C6 240 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 ADAD2Q8NCV1 583 aaKnown RBP13.7□□□□□ -0.22
SCARF1-203ENST00000434376 UQCC2Q9BRT2 126 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 IGLV3-12A0A075B6K2 115 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 TRAV20A0A0B4J274 112 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 SULT1C2O00338 296 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 ZNF208O43345 1280 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 IFI6P09912 130 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 SPP1P10451 314 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 CD96P40200 585 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 CARD18P57730 90 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms