RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 B2MP61769 119 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 SLC35A1P78382 337 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 CD164Q04900 197 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 OR10J3Q5JRS4 329 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 DRAM2Q6UX65 266 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 Q6ZT83 130 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 TMEM156Q8N614 296 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 TMEM252Q8N6L7 170 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 C19orf18Q8NEA5 215 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 OR4K17Q8NGC6 315 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 OR4K2Q8NGD2 314 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 OR51Q1Q8NH59 317 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 MARC2Q969Z3 335 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 FAM3DQ96BQ1 224 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 COL21A1Q96P44 957 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 GABRG3Q99928 467 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 EBF4Q9BQW3 602 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 HRASLSQ9HDD0 168 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 TAS2R9Q9NYW1 312 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 TRMT112Q9UI30 125 aaKnown RBP3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 SLC7A11Q9UPY5 501 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 ST3GAL6Q9Y274 331 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 WIF1Q9Y5W5 379 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 CHD4Q14839 1912 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 SLC5A10A0PJK1 596 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 PINLYPA6NC86 204 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 TMEM114B3SHH9 223 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 H3BNH8 94 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 CYTH3O43739 400 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 RDH16O75452 317 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 RAB3DO95716 219 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 C6orf47O95873 294 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 CD8AP01732 235 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 RLN2P04090 185 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 CSF3P09919 207 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 SLC35G6P0C7Q6 338 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 LIMS3P0CW19 117 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 LIMS4P0CW20 117 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 PGA5P0DJD9 388 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 ATF6P18850 670 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 CELP19835 753 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 FUT3P21217 361 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 PPICP45877 212 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 RND2P52198 227 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 ZNF133P52736 654 aaPredicted RBP3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 AP2S1P53680 142 aaPredicted RBP3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 APOC4P55056 127 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 TAS2R31P59538 309 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 TAS2R19P59542 299 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 PPP1CBP62140 327 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 GLO1Q04760 184 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 SMARCB1Q12824 385 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 ZNF266Q14584 549 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 TMED2Q15363 201 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 TTMPQ5BVD1 217 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 CLVS2Q5SYC1 327 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 SYT6Q5T7P8 510 aaPredicted RBP3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 FAM173BQ6P4H8 233 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 H2AFVQ71UI9 128 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 ZNF589Q86UQ0 364 aaPredicted RBP3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 ARRDC1Q8N5I2 433 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 METTL13Q8N6R0 699 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 TTLQ8NG68 377 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 OR5L1Q8NGL2 311 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 OR5P2Q8WZ92 322 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 IL22RA2Q969J5 263 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 OPTNQ96CV9 577 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 ZNF799Q96GE5 643 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 SLC40A1Q9NP59 571 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 AIG1Q9NVV5 245 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 MARCH5Q9NX47 278 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 BABAM2Q9NXR7 383 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 ZNF629Q9UEG4 869 aaPredicted RBP3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 PRO0461Q9UI25 63 aa3.73□□□□□ -1.81
CCDC88A-206ENST00000430086 TRAV8-4A0A0B4J246 113 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 IGKV1D-13A0A0B4J2D9 117 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 VGLL3A8MV65 326 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 H0Y980 276 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 CDIPTO14735 213 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 TCAPO15273 167 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 MPZL2O60487 215 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 SHOX2O60902 331 aaPredicted RBP3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 MMP23AO75900 390 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 MPZL1O95297 269 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 P01737 135 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 CTXN2P0C2S0 81 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 PGA4P0DJD7 388 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 PGA3P0DJD8 388 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 OR5H8P0DN80 308 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 IGKV1-13P0DP09 117 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 ERGP11308 486 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 RAB3BP20337 219 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 GABRR1P24046 479 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 HTR1DP28221 377 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 GTF2H1P32780 548 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 CAV2P51636 162 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 UBE2E1P51965 193 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 RAB38P57729 211 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 ACTBP60709 375 aa3.72□□□□□ -1.81
CCDC88A-206ENST00000430086 ACTG1P63261 375 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms