RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 FAM71F1Q96KD3 344 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 BANF2Q9H503 90 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 AKIRIN1Q9H9L7 192 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 OCIAD1Q9NX40 245 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 GDF2Q9UK05 429 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 RNF24Q9Y225 148 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 MYO7BQ6PIF6 2116 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 COL5A1P20908 1838 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 OR2AT4A6NND4 320 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF726A6NNF4 738 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 SULT1C2O00338 296 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 IGHG1P01857 330 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 PMP2P02689 132 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 ABOP16442 354 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF43P17038 809 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 ZBTB25P24278 435 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 HRH1P35367 487 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 TMEM176BQ3YBM2 270 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 AWAT2Q6E213 333 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 LCN10Q6JVE6 187 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 OR51E1Q8TCB6 317 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 ROBO4Q8WZ75 1007 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 CLDN23Q96B33 292 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 ADAT3Q96EY9 351 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 DNTTIP1Q9H147 329 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 SLC25A32Q9H2D1 315 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 GAREM1Q9H706 876 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 UPB1Q9UBR1 384 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 DMRT1Q9Y5R6 373 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 FRYQ5TBA9 3013 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 TMEM200CA6NKL6 621 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 B4E171 279 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 RAB27BO00194 218 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 CRTAPO75718 401 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-205ENST00000425443 CRYBA1P05813 215 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 PNLIPP16233 465 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF20P17024 532 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 GUCA1AP43080 201 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-205ENST00000425443 PLPPR5Q32ZL2 321 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF260Q3ZCT1 412 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 AQP3Q92482 292 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 ZBTB8AQ96BR9 441 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 JSRP1Q96MG2 331 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-205ENST00000425443 NICN1Q9BSH3 213 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 TAS2R3Q9NYW6 316 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 COMMD9Q9P000 198 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 PCDHB10Q9UN67 800 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 A0A1W2PP11 408 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 FSTP19883 344 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 CD96P40200 585 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 SRSF3P84103 164 aaKnown RBP11.48□□□□□ -0.57
COL12A1-205ENST00000425443 MFAP5Q13361 173 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 ABHD12BQ7Z5M8 362 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-205ENST00000425443 BHLHE23Q8NDY6 225 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 MR1Q95460 341 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 RASL10BQ96S79 203 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 SLC25A21Q9BQT8 299 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-205ENST00000425443 TREM2Q9NZC2 230 aa11.48□□□□□ -0.57
COL12A1-205ENST00000425443 AHCTF1Q8WYP5 2266 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 C5orf51A6NDU8 294 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 SULT2B1O00204 365 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 TP53I11O14683 189 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 EFNA2O43921 213 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 GDF9O60383 454 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 DIRAS3O95661 229 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 UBBP0CG47 229 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 ADCYAP1P18509 176 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 KLK2P20151 261 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 BDKRB2P30411 391 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 RPS27AP62979 156 aaKnown RBP11.47□□□□□ -0.57
COL12A1-205ENST00000425443 UBA52P62987 128 aaKnown RBP11.47□□□□□ -0.57
COL12A1-205ENST00000425443 IL13RA1P78552 427 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 SSBP1Q04837 148 aaKnown RBP11.47□□□□□ -0.57
COL12A1-205ENST00000425443 TCEAL6Q6IPX3 200 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 ARMC10Q8N2F6 343 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 NKAIN3Q8N8D7 197 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 OR1S2Q8NGQ3 325 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 SAP25Q8TEE9 199 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 GLYATL2Q8WU03 294 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 RNF133Q8WVZ7 376 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 MAFIPQ8WZ33 124 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 NAT6Q93015 286 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 SPACA9Q96E40 222 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-205ENST00000425443 TMEM41AQ96HV5 264 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 PBOV1Q9GZY1 135 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 GAB2Q9UQC2 676 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 CHTOPQ9Y3Y2 248 aaKnown RBP11.47□□□□□ -0.57
COL12A1-205ENST00000425443 J3QW42 95 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 BCL2L11O43521 198 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 MPIG6BO95866 241 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 IFNA6P05013 189 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 QDPRP09417 244 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 DLSTP36957 453 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 RFC3P40938 356 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 PPIAP62937 165 aaKnown RBP11.47□□□□□ -0.57
COL12A1-205ENST00000425443 TMEM185AQ8NFB2 350 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 OR5D14Q8NGL3 314 aa11.47□□□□□ -0.57
COL12A1-205ENST00000425443 FOXRED1Q96CU9 486 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-205ENST00000425443 ZDBF2Q9HCK1 2354 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms