RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NEGR1Q7Z3B1 354 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ZNF280BQ86YH2 543 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 KRTCAP2Q8N6L1 136 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SLC16A11Q8NCK7 471 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 REPS2Q8NFH8 660 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ESAMQ96AP7 390 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ZNF587Q96SQ5 575 aaPredicted RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 GPA33Q99795 319 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SLC25A51Q9H1U9 297 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ZNF391Q9UJN7 358 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 IGSF23A1L1A6 192 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ATP1B1P05026 303 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SELPP16109 830 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 AMD1P17707 334 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 EPORP19235 508 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 CFPP27918 469 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 IMPA1P29218 277 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 CTRLP40313 264 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 RPS13P62277 151 aaKnown RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 SRSF6Q13247 344 aaKnown RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 DHRS2Q13268 280 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 KIAA1644Q3SXP7 199 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 OR2G6Q5TZ20 316 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SPATA31B1PQ5VZV4 182 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 LRRC70Q7Z2Q7 622 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SIRT6Q8N6T7 355 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 OR5W2Q8NH69 310 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 NEU4Q8WWR8 484 aaPredicted RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 IMP4Q96G21 291 aaKnown RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 SDSLQ96GA7 329 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 PIMREGQ9BSJ6 248 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 DNAJC27Q9NZQ0 273 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 FUT9Q9Y231 359 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 LOC100509620A0A075B734 347 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 HLA-DQB2P05538 268 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 IL3P08700 152 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 SLC6A11P48066 632 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 ZNF83P51522 516 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 WNT3AP56704 352 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 COL10A1Q03692 680 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 RGNQ15493 299 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 TMEM183BQ1AE95 376 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PRTGQ2VWP7 1150 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 SUMF2Q8NBJ7 301 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 OR2T33Q8NG76 320 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 NDRG1Q92597 394 aaKnown RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 CXorf40BQ96DE9 158 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 GNRHR2Q96P88 292 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 TMEM39BQ9GZU3 492 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 ZNF703Q9H7S9 590 aaPredicted RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 DMRT3Q9NQL9 472 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 LYRM2Q9NU23 88 aaPredicted RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 MARCH4Q9P2E8 410 aaPredicted RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 NTNG1Q9Y2I2 539 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 WNT6Q9Y6F9 365 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 HIDE1A8MVS5 230 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PYCARD-AS1I3L0S3 204 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PIRO00625 290 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 CDS2O95674 445 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 KLKB1P03952 638 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 RPS15P62841 145 aaKnown RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 FKBP1AP62942 108 aaKnown RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 H3F3AP84243 136 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PLCXD2Q0VAA5 305 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 FOXF1Q12946 379 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 INSL4Q14641 139 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 LTC4SQ16873 150 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 TPRG1Q6ZUI0 275 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 MOGAT3Q86VF5 341 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 TEX26Q8N6G2 289 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 OR13C9Q8NGT0 318 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 RAB39BQ96DA2 213 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PARP11Q9NR21 331 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PLA2G2EQ9NZK7 142 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 MRPL15Q9P015 296 aaKnown RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 THYN1Q9P016 225 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 FBXO4Q9UKT5 387 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PLXNA4Q9HCM2 1894 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 FAM230AA0A1W2PPH8 454 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 XKRYO14609 159 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 B4GALT3O60512 393 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 SCGB2A1O75556 95 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 S1PR2O95136 353 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 RGRP47804 291 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 GFRA1P56159 465 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PLP1P60201 277 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 SYPL1Q16563 259 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 ANKRD55Q3KP44 614 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 C1orf53Q5VUE5 145 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 ZNF322Q6U7Q0 402 aaPredicted RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 APOOLQ6UXV4 268 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 IZUMO1Q8IYV9 350 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 BEST3Q8N1M1 668 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 NHLRC2Q8NBF2 726 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 OR1B1Q8NGR6 318 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 GRAPLQ8TC17 118 aaPredicted RBP4.63□□□□□ -1.67
HERC4-205ENST00000412272 NUDT8Q8WV74 236 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 SLC25A38Q96DW6 304 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 HIST1H2AAQ96QV6 131 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 RSG1Q9BU20 258 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms