RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 PEBP4Q96S96 227 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 TMEM38AQ9H6F2 299 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 BEX1Q9HBH7 125 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 AGPAT4Q9NRZ5 378 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 PLXNB3Q9ULL4 1909 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 SIGLEC1Q9BZZ2 1709 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 TRPM6Q9BX84 2022 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 ADAMTS7Q9UKP4 1686 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 IGKV2-29A2NJV5 120 aaPredicted RBP0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 AP3B1O00203 1094 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 NDC80O14777 642 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 S1PR2O95136 353 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 LSM8O95777 96 aaKnown RBP0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 PPICP45877 212 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 GBX2P52951 348 aaPredicted RBP0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 ATP5G2Q06055 141 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 KLHL40Q2TBA0 621 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 MRPL2Q5T653 305 aaKnown RBP0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 KDM4DQ6B0I6 523 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 C22orf42Q6IC83 251 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 LYPD6BQ8NI32 183 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 ACMSDQ8TDX5 336 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 ALS2CR12Q96Q35 445 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 EMC6Q9BV81 110 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 SFXN3Q9BWM7 321 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 LRRC40Q9H9A6 602 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 CYP3A43Q9HB55 503 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF286AQ9HBT8 521 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 MRM3Q9HC36 420 aaKnown RBP0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 SLC17A4Q9Y2C5 497 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 ACOT9Q9Y305 439 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 ICOSQ9Y6W8 199 aa0.35□□□□□ -2.35
RNU2-54P-201ENST00000410299 LCTP09848 1927 aa0.34□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF469Q96JG9 3925 aaPredicted RBP0.34□□□□□ -2.35
RNU2-54P-201ENST00000410299 TMEM72A0PK05 275 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 IGLL5B9A064 214 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 C9JVG2 144 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 G3V3Q6 166 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 M0R3G1 203 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 NDUFAB1O14561 156 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 EIF3HO15372 352 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 SLC16A7O60669 478 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 SLC19A2O60779 497 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 SERPINA3P01011 423 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 SEC11BP0C7V7 166 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 GABRG2P18507 467 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 NCF2P19878 526 aaPredicted RBP0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 CFHR2P36980 270 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 FABP6P51161 128 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 ZNF140P52738 457 aaPredicted RBP0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 FOXF1Q12946 379 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 PPP1R7Q15435 360 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 COMTD1Q86VU5 262 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 HORMAD1Q86X24 394 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR9K2Q8NGE7 335 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR10D4PQ8NGN7 298 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 OR4A4PQ8NGN8 299 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 NT5C3BQ969T7 300 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 TBC1D31Q96DN5 1066 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 TSGA13Q96PP4 275 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 TRIB3Q96RU7 358 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 TEAD3Q99594 435 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 TXNDC17Q9BRA2 123 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 TTTY12Q9BZ98 90 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 TBL1XR1Q9BZK7 514 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 TUBA4BQ9H853 241 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 METTL7AQ9H8H3 244 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 ACP6Q9NPH0 428 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 MRPL16Q9NX20 251 aaKnown RBP0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 DDX19BQ9UMR2 479 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 ZNF443Q9Y2A4 671 aaPredicted RBP0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 MIA3Q5JRA6 1907 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 AK9Q5TCS8 1911 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
RNU2-54P-201ENST00000410299 CCDC88CQ9P219 2028 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 FN1P02751 2386 aaKnown RBP0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 TRBV9A0A0B4J1U6 114 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 IGKV1D-43A0A0B4J1Z2 117 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 A0A0B4J2C4 111 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 A0A0G2JMP0 313 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 A0A0X1KG70 313 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 A0A1B0GU33 70 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 ZNF860A6NHJ4 632 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 ANKRD65E5RJM6 399 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 FFAR1O14842 300 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 PSPHP1O15172 72 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 SLC31A1O15431 190 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 HBE1P02100 147 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 ANGP03950 147 aaKnown RBP0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 TRGV3P03979 118 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 SLC2A3P11169 496 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 RRM2P31350 389 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 TUFMP49411 452 aaKnown RBP0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 HNMTP50135 292 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 RAB10P61026 200 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 PRB3Q04118 309 aaPredicted RBP0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 PRDX4Q13162 271 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 ZYG11AQ6WRX3 759 aa0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 TRMT10CQ7L0Y3 403 aaKnown RBP0.33□□□□□ -2.36
RNU2-54P-201ENST00000410299 MSRB3Q8IXL7 192 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms