RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 YIPF6Q96EC8 236 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 DERL3Q96Q80 235 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 SLC30A2Q9BRI3 323 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 MS4A5Q9H3V2 200 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 DYNLRB1Q9NP97 96 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 MYEF2Q9P2K5 600 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 CKLFQ9UBR5 152 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 SSR3Q9UNL2 185 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 CELSR1Q9NYQ6 3014 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 TRDV1A0A1B0GX56 115 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 GABRPO00591 440 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 GMDSO60547 372 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 ARL6IP5O75915 188 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 NRASP01111 189 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 CD8AP01732 235 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 PTH2RP49190 550 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 FABP5Q01469 135 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 TMEM255AQ5JRV8 349 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 TMEM42Q69YG0 159 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 PRSS57Q6UWY2 283 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 UNQ9370/PRO34162Q6UXP9 181 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 GDPGP1Q6ZNW5 385 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 UTS2BQ765I0 119 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 CEACAM19Q7Z692 300 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 PIGCQ92535 297 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 TMIGD2Q96BF3 282 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 ADAT3Q96EY9 351 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 PERPQ96FX8 193 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 HIST1H2AAQ96QV6 131 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 DIRC2Q96SL1 478 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 TRAF4Q9BUZ4 470 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 CHST5Q9GZS9 411 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 NEK6Q9HC98 313 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 EXOSC4Q9NPD3 245 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 ZDHHC8Q9ULC8 765 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 GSTK1Q9Y2Q3 226 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 RHBDD3Q9Y3P4 386 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 PMF1-BGLAPU3KQ54 211 aa14.08□□□□□ -0.16
TSPAN4-208ENST00000409531 ZFHX3Q15911 3703 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 TRBV5-7A0A0A0MS05 114 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 ANKRD61A6NGH8 418 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 ANXA2P2A6NMY6 339 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 LMX1BO60663 402 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 FSTP19883 344 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 GADD45AP24522 165 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 FGF9P31371 208 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 CRYBB2P43320 205 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 ZNF81P51508 661 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 MZT1Q08AG7 82 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 PRDX4Q13162 271 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 OR8G1Q15617 311 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 MST1LQ2TV78 715 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 TMEM91Q6ZNR0 172 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 ZDHHC23Q8IYP9 409 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 SPERTQ8NA61 448 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 TRMT61AQ96FX7 289 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 FUNDC2Q9BWH2 189 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 ZCCHC4Q9H5U6 513 aa14.07□□□□□ -0.16
TSPAN4-208ENST00000409531 MED13LQ71F56 2210 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 A0A1B0GWJ7 208 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 A6NIN4 97 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 ZNF850A8MQ14 1090 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 LILRA1O75019 489 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 ALX3O95076 343 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 UCHL1P09936 223 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 OCMP0CE72 109 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 CA6P23280 308 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 TNFSF4P23510 183 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 ALDH3B1P43353 468 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 MAGEB1P43366 347 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 PPOXP50336 477 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 PPP3R1P63098 170 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 BLMHQ13867 455 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 CNN3Q15417 329 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 HSD17B12Q53GQ0 312 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 KRTAP1-3Q8IUG1 177 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 WFDC11Q8NEX6 87 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 OR8S1Q8NH09 359 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 UBASH3BQ8TF42 649 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 ADAT1Q9BUB4 502 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 TMUB1Q9BVT8 246 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 SLITRK2Q9H156 845 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 OR51E2Q9H255 320 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 MSL2Q9HCI7 577 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 NOX4Q9NPH5 578 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 NKIRAS2Q9NYR9 191 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 FOXJ3Q9UPW0 622 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 SLC7A11Q9UPY5 501 aa14.06□□□□□ -0.16
TSPAN4-208ENST00000409531 LOC100506127A0A0U1RQW1 187 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 C17orf100A8MU93 164 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 SULT1B1O43704 296 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 AIREO43918 545 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 GPX5O75715 221 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 ERCC1P07992 297 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 ADH4P08319 380 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 CD99P14209 185 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 RAB3AP20336 220 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 ATP5J2P56134 94 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 INSL4Q14641 139 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms