RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 COMMD2Q86X83 199 aa12.47□□□□□ -0.41
SUMO1-207ENST00000409498 CIARTQ8N365 385 aaPredicted RBP12.47□□□□□ -0.41
SUMO1-207ENST00000409498 HPSE2Q8WWQ2 592 aa12.47□□□□□ -0.41
SUMO1-207ENST00000409498 PIGCQ92535 297 aa12.47□□□□□ -0.41
SUMO1-207ENST00000409498 CCL17Q92583 94 aa12.47□□□□□ -0.41
SUMO1-207ENST00000409498 MICU1Q9BPX6 476 aa12.47□□□□□ -0.41
SUMO1-207ENST00000409498 PAPOLGQ9BWT3 736 aaKnown RBP12.47□□□□□ -0.41
SUMO1-207ENST00000409498 PPP1R3EQ9H7J1 279 aa12.47□□□□□ -0.41
SUMO1-207ENST00000409498 UBAP1Q9NZ09 502 aa12.47□□□□□ -0.41
SUMO1-207ENST00000409498 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
SUMO1-207ENST00000409498 CR1P17927 2039 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 LOC107986453A0A1B0GWG9 222 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 TMEM210A6NLX4 147 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 ANXA2P2A6NMY6 339 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 CLDN25C9JDP6 229 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 RNF223E7ERA6 249 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 PTGES3LE9PB15 166 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 TMEM178BH3BS89 294 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 H7C1Q1 480 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 ZFPL1O95159 310 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 LALBAP00709 142 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 CD1AP06126 327 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 FAHP16930 419 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 USF1P22415 310 aaPredicted RBP12.46□□□□□ -0.41
SUMO1-207ENST00000409498 CFHR2P36980 270 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 GTF2A1P52655 376 aaPredicted RBP12.46□□□□□ -0.41
SUMO1-207ENST00000409498 CDH15P55291 814 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 WNT4P56705 351 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 BDH1Q02338 343 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 CARTPTQ16568 116 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 CEACAM21Q3KPI0 293 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 CLVS2Q5SYC1 327 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 XAF1Q6GPH4 301 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 WDR86Q86TI4 376 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 C11orf53Q8IXP5 236 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 ZDHHC23Q8IYP9 409 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 RDH10Q8IZV5 341 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 OR1M1Q8NGA1 313 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 OR5A2Q8NGI9 324 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 OR8S1Q8NH09 359 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 GATAD2BQ8WXI9 593 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 YTHDF1Q9BYJ9 559 aaKnown RBP12.46□□□□□ -0.41
SUMO1-207ENST00000409498 FGF23Q9GZV9 251 aaPredicted RBP12.46□□□□□ -0.41
SUMO1-207ENST00000409498 TRIM36Q9NQ86 728 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 HHLA2Q9UM44 414 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 ERGIC3Q9Y282 383 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 NPTNQ9Y639 398 aa12.46□□□□□ -0.41
SUMO1-207ENST00000409498 TRBV2A0A0J9YWF9 115 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 MRPS14O60783 128 aaKnown RBP12.45□□□□□ -0.42
SUMO1-207ENST00000409498 NRASP01111 189 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 TAS2R43P59537 309 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 ZNF154Q13106 437 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 MPPED2Q15777 294 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 ODF4Q2M2E3 257 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 DMKNQ6E0U4 476 aaPredicted RBP12.45□□□□□ -0.42
SUMO1-207ENST00000409498 PRSS48Q7RTY5 328 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 MOGAT3Q86VF5 341 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 OR5AK2Q8NH90 309 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 ZNF420Q8TAQ5 688 aaPredicted RBP12.45□□□□□ -0.42
SUMO1-207ENST00000409498 SGCDQ92629 289 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 HPS1Q92902 700 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 RAB1CQ92928 201 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 DVL3Q92997 716 aaPredicted RBP12.45□□□□□ -0.42
SUMO1-207ENST00000409498 SMIM19Q96E16 107 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 C1orf159Q96HA4 380 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 TECTBQ96PL2 329 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 RTL8AQ9BWD3 113 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 CHST5Q9GZS9 411 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 COMMD4Q9H0A8 199 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 ERVK-18Q9QC07 812 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 BLOC1S6Q9UL45 172 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 LSM2Q9Y333 95 aaKnown RBP12.45□□□□□ -0.42
SUMO1-207ENST00000409498 WIPI2Q9Y4P8 454 aa12.45□□□□□ -0.42
SUMO1-207ENST00000409498 SIRT4Q9Y6E7 314 aaPredicted RBP12.45□□□□□ -0.42
SUMO1-207ENST00000409498 MED13LQ71F56 2210 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 IGHV4-61A0A0C4DH41 118 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 OR5B21A6NL26 309 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 MYL12BO14950 172 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 PPIHO43447 177 aaKnown RBP12.44□□□□□ -0.42
SUMO1-207ENST00000409498 RGS10O43665 173 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 PLPP2O43688 288 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 ALX3O95076 343 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 LHBP01229 141 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 IGHV2-70P01814 119 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 INHBBP09529 407 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 THBS2P35442 1172 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 GABARAPL2P60520 117 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 GNG3P63215 75 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 PRAMEF6Q5VXH4 476 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 UTS2BQ765I0 119 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 C1orf87Q8N0U7 546 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 ZNF676Q8N7Q3 588 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 PP6455Q8WZ26 134 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 TIMD4Q96H15 378 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 RNF170Q96K19 258 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 HIST1H2AAQ96QV6 131 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 MND1Q9BWT6 205 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 DCAF16Q9NXF7 216 aa12.44□□□□□ -0.42
SUMO1-207ENST00000409498 TREM2Q9NZC2 230 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms