RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 APCDD1LQ8NCL9 501 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 OR5M8Q8NGP6 311 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 MRPS24Q96EL2 167 aaKnown RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 CCNL2Q96S94 520 aaPredicted RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 PRRT1Q99946 306 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 EHFQ9NZC4 300 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 SRPK3Q9UPE1 567 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 LSM5Q9Y4Y9 91 aaKnown RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 DOCK11Q5JSL3 2073 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 MS4A18H0YCH9 400 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 EIF4E2O60573 245 aaKnown RBP11.84□□□□□ -0.51
COL6A2-204ENST00000409416 SERPINF1P36955 418 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 TLE1Q04724 770 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 MS4A18Q3C1V0 323 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 TSPO2Q5TGU0 170 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 OR4K15Q8NH41 348 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 LIPHQ8WWY8 451 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 CSAG2Q9Y5P2 127 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 F8W036 122 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 MGMTP16455 207 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF16P17020 682 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-204ENST00000409416 MPGP29372 298 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 MYPOPQ86VE0 399 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-204ENST00000409416 OR1S2Q8NGQ3 325 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 OR6K3Q8NGY3 331 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 TMED6Q8WW62 240 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 PIGLQ9Y2B2 252 aa11.84□□□□□ -0.51
COL6A2-204ENST00000409416 A0A0D9SG52 128 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 TUBAL3A6NHL2 446 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 EFNA2O43921 213 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 TSPAN2O60636 221 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 F12P00748 615 aaPredicted RBP11.83□□□□□ -0.51
COL6A2-204ENST00000409416 P04436 131 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 ATP1A1-AS1Q5TC04 95 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 TMPPEQ6ZT21 453 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 SLC16A13Q7RTY0 426 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 NAXDQ8IW45 347 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 GTPBP8Q8N3Z3 284 aaPredicted RBP11.83□□□□□ -0.51
COL6A2-204ENST00000409416 OR1M1Q8NGA1 313 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 OR5D14Q8NGL3 314 aa11.83□□□□□ -0.51
COL6A2-204ENST00000409416 FOXRED1Q96CU9 486 aaPredicted RBP11.83□□□□□ -0.51
COL6A2-204ENST00000409416 CFAP47Q6ZTR5 3102 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 TRAV39A0A0B4J263 110 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 A0A0G2JMM0 328 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 A0A1W2PPB8 328 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 A0A1W2PRS3 328 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 KIR3DP1A8MWS1 328 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 SNTB1Q13884 538 aaKnown RBP11.83□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF273Q14593 569 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 TEX30Q5JUR7 227 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 LYG2Q86SG7 212 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 D2HGDHQ8N465 521 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 PLPPR2Q96GM1 343 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 ARHGAP5-AS1Q96IT6 56 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 UTP23Q9BRU9 249 aaKnown RBP11.83□□□□□ -0.52
COL6A2-204ENST00000409416 TMEM59Q9BXS4 323 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 NIT2Q9NQR4 276 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 PLEKHJ1Q9NW61 149 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 C19orf25Q9UFG5 118 aaPredicted RBP11.83□□□□□ -0.52
COL6A2-204ENST00000409416 CHD8Q9HCK8 2581 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF705EA8MWA4 302 aaPredicted RBP11.83□□□□□ -0.52
COL6A2-204ENST00000409416 GPR31O00270 319 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 FARS2O95363 451 aaKnown RBP11.83□□□□□ -0.52
COL6A2-204ENST00000409416 SERPINA5P05154 406 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 HTR5AP47898 357 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 MTCP1P56278 107 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 AIMP2Q13155 320 aaKnown RBP11.83□□□□□ -0.52
COL6A2-204ENST00000409416 PAN3Q58A45 887 aaKnown RBP11.83□□□□□ -0.52
COL6A2-204ENST00000409416 TMPRSS7Q7RTY8 843 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 C6orf201Q7Z4U5 140 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 AGBL5Q8NDL9 886 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 RNASE11Q8TAA1 199 aaKnown RBP11.83□□□□□ -0.52
COL6A2-204ENST00000409416 ELP5Q8TE02 316 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 RAB3CQ96E17 227 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 SGCZQ96LD1 299 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 SHARPINQ9H0F6 387 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 RAB22AQ9UL26 194 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 PCDHB10Q9UN67 800 aa11.83□□□□□ -0.52
COL6A2-204ENST00000409416 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 A8MXK9 166 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 DXOO77932 396 aaKnown RBP11.82□□□□□ -0.52
COL6A2-204ENST00000409416 APOC1P02654 83 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 FGF2P09038 288 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 CSRP1P21291 193 aaKnown RBP11.82□□□□□ -0.52
COL6A2-204ENST00000409416 OMGP23515 440 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 DCAF7P61962 342 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 MEF2DQ14814 521 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 CHRFAM7AQ494W8 412 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 DHRS13Q6UX07 377 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 G6PC2Q9NQR9 355 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 KCNK7Q9Y2U2 307 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 WIF1Q9Y5W5 379 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 OR7C1O76099 320 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-204ENST00000409416 HPP00738 406 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 IFI6P09912 130 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 EPHA8P29322 1005 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-204ENST00000409416 FOLR3P41439 243 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 GABRA4P48169 554 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms