RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 GABRPO00591 440 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 GMDSO60547 372 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 RGS9O75916 674 aaPredicted RBP12□□□□□ -0.49
CHRNA1-204ENST00000409323 NRASP01111 189 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 IGHV1-46P01743 117 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 TGFBR1P36897 503 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 LSM3P62310 102 aaKnown RBP12□□□□□ -0.49
CHRNA1-204ENST00000409323 OR8G1Q15617 311 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 UBE2V2Q15819 145 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 Q499Y3 187 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 PLCXD3Q63HM9 321 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 RNF144BQ7Z419 303 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 OR51A2Q8NGJ7 313 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 UBASH3BQ8TF42 649 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 PIGTQ969N2 578 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 ELMOD3Q96FG2 381 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 DERL3Q96Q80 235 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 CHCHD6Q9BRQ6 235 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 NAA50Q9GZZ1 169 aaKnown RBP12□□□□□ -0.49
CHRNA1-204ENST00000409323 ABCA12Q86UK0 2595 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 TRAV8-7A0A075B6U6 113 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 SMIM30A4D0T7 59 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 GPX5O75715 221 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 CD1AP06126 327 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 DDOSTP39656 456 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 CRYBB2P43320 205 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 HOXA4Q00056 320 aaPredicted RBP11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 GPR50Q13585 617 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 ZMAT1Q5H9K5 638 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 PRAMEF6Q5VXH4 476 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 C22orf42Q6IC83 251 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 Q6ZSR3 168 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 TGIF2LYQ8IUE0 185 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 ZDHHC23Q8IYP9 409 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 CSNK2A3Q8NEV1 391 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 OR13G1Q8NGZ3 307 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 OR8S1Q8NH09 359 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 HPSE2Q8WWQ2 592 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 SORCS2Q96PQ0 1159 aa11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 MRPL15Q9P015 296 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-204ENST00000409323 IGKV1-9A0A0C4DH69 117 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 FAM230AA0A1W2PPH8 454 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 C17orf100A8MU93 164 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 NCR1O76036 304 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 MAS1P04201 325 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 THBS2P35442 1172 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 EVX1P49640 407 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 GPM6AP51674 278 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 CLVS2Q5SYC1 327 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 C20orf204Q6ZNR8 217 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 MS4A15Q8N5U1 240 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 ITLN1Q8WWA0 313 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 RFT1Q96AA3 541 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 ITPKCQ96DU7 683 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 UFSP2Q9NUQ7 469 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 POLQO75417 2590 aa11.98□□□□□ -0.49
CHRNA1-204ENST00000409323 TRBV5-7A0A0A0MS05 114 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 LOC100289279A0A1B0GTE1 492 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CCDC160A6NGH7 325 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 LYNX1G3V0Z9 82 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CDC14BO60729 498 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 SC5DO75845 299 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 PLATP00750 562 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CST4P01036 141 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CD2P06729 351 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 GRPP07492 148 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 LYNX1P0DP58 116 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 ZNF12P17014 697 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CD53P19397 219 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 TNFAIP6P98066 277 aaPredicted RBP11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 MAB21L1Q13394 359 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 PAMR1Q6UXH9 720 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 WDR86Q86TI4 376 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 SERPINA12Q8IW75 414 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 BATF2Q8N1L9 274 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 PARP16Q8N5Y8 322 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 DNAAF1Q8NEP3 725 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 RNF170Q96K19 258 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 OR2V2Q96R30 315 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CENPOQ9BU64 300 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CHST5Q9GZS9 411 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 STUB1Q9UNE7 303 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CACNG2Q9Y698 323 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 CSMD2Q7Z408 3487 aa11.97□□□□□ -0.49
CHRNA1-204ENST00000409323 SHISA3A0PJX4 238 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 ANXA2P2A6NMY6 339 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 ZNF732B4DXR9 585 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 HPXP02790 462 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 OCMP0CE72 109 aaPredicted RBP11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 PSMA1P25786 263 aaKnown RBP11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 CALRP27797 417 aaKnown RBP11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 MPPED2Q15777 294 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 MOGQ16653 247 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 TMEM42Q69YG0 159 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 UNQ9370/PRO34162Q6UXP9 181 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 GDPGP1Q6ZNW5 385 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 FTMTQ8N4E7 242 aa11.96□□□□□ -0.49
CHRNA1-204ENST00000409323 OR5P3Q8WZ94 311 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms