RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 IGFBP3P17936 291 aaPredicted RBP17.44■□□□□ 0.38
VSX1-203ENST00000409285 GNALP38405 381 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 PPOXP50336 477 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 ZDHHC23Q8IYP9 409 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 IGFBPL1Q8WX77 278 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 ITPKCQ96DU7 683 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 DIRC2Q96SL1 478 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 MS4A5Q9H3V2 200 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 ZCCHC4Q9H5U6 513 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 NOX4Q9NPH5 578 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 TXNL4BQ9NX01 149 aaKnown RBP17.44■□□□□ 0.38
VSX1-203ENST00000409285 CKLFQ9UBR5 152 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 FOXJ3Q9UPW0 622 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 SPG11Q96JI7 2443 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 A6NIN4 97 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 MLNRO43193 412 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 AIREO43918 545 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 CA6P23280 308 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 PRDX4Q13162 271 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 CEACAM21Q3KPI0 293 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 HSD17B12Q53GQ0 312 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 SLC16A12Q6ZSM3 486 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 BCL7BQ9BQE9 202 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 ADAT1Q9BUB4 502 aaKnown RBP17.44■□□□□ 0.38
VSX1-203ENST00000409285 PPIL3Q9H2H8 161 aaKnown RBP17.44■□□□□ 0.38
VSX1-203ENST00000409285 MSL2Q9HCI7 577 aa17.44■□□□□ 0.38
VSX1-203ENST00000409285 CSMD2Q7Z408 3487 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 ITPR2Q14571 2701 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 ANXA2P2A6NMY6 339 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 ZNF850A8MQ14 1090 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 C17orf100A8MU93 164 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 SULT1B1O43704 296 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 BMP4P12644 408 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 ALDH3B1P43353 468 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 ZNF81P51508 661 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 CNN3Q15417 329 aaKnown RBP17.43■□□□□ 0.38
VSX1-203ENST00000409285 UBE2V2Q15819 145 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 FAM27D1Q5T7N8 215 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 SPERTQ8NA61 448 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 HPSE2Q8WWQ2 592 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 PIGCQ92535 297 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 SPSB1Q96BD6 273 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 CHCHD6Q9BRQ6 235 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 TAS2R4Q9NYW5 299 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 GSTK1Q9Y2Q3 226 aa17.43■□□□□ 0.38
VSX1-203ENST00000409285 DYSFO75923 2080 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 CD55P08174 381 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 FAM209AQ5JX71 171 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 C22orf42Q6IC83 251 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 CELF2-AS1Q8N7Q2 184 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 DNAAF1Q8NEP3 725 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 OR5P3Q8WZ94 311 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 RPL3LQ92901 407 aaKnown RBP17.42■□□□□ 0.38
VSX1-203ENST00000409285 DYNLRB1Q9NP97 96 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 NKIRAS2Q9NYR9 191 aa17.42■□□□□ 0.38
VSX1-203ENST00000409285 TRAV8-7A0A075B6U6 113 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 TRAV1-2A0A0B4J238 106 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 IGKV1-9A0A0C4DH69 117 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 OR5B21A6NL26 309 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 H7C417 338 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 PTBP3O95758 552 aaKnown RBP17.41■□□□□ 0.38
VSX1-203ENST00000409285 NAT2P11245 290 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 SRMP19623 302 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 RAB3AP20336 220 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 CALRP27797 417 aaKnown RBP17.41■□□□□ 0.38
VSX1-203ENST00000409285 TMBIM6P55061 237 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 PPP3R1P63098 170 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 MZT1Q08AG7 82 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 OR8G1Q15617 311 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 CTF1Q16619 201 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 PCGF3Q3KNV8 242 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 GPR107Q5VW38 600 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 PLCXD3Q63HM9 321 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 OR1M1Q8NGA1 313 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 OR5A2Q8NGI9 324 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 OR13C9Q8NGT0 318 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 ZNF420Q8TAQ5 688 aaPredicted RBP17.41■□□□□ 0.38
VSX1-203ENST00000409285 RAB2BQ8WUD1 216 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 CENPOQ9BU64 300 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 PPP1R3EQ9H7J1 279 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 EXOSC4Q9NPD3 245 aaKnown RBP17.41■□□□□ 0.38
VSX1-203ENST00000409285 GPR173Q9NS66 373 aa17.41■□□□□ 0.38
VSX1-203ENST00000409285 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.4■□□□□ 0.38
VSX1-203ENST00000409285 LOC100506127A0A0U1RQW1 187 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 A0A1W2PPK0 400 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 IGHV1-46P01743 117 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 ALDOBP05062 364 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 ERCC1P07992 297 aaPredicted RBP17.4■□□□□ 0.38
VSX1-203ENST00000409285 ATF1P18846 271 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 CD200P41217 278 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 FAM76BQ5HYJ3 339 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 NKAIN3Q8N8D7 197 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 OR2Z1Q8NG97 314 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 OR10AD1Q8NGE0 317 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 OR8S1Q8NH09 359 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 GTF3AQ92664 365 aaKnown RBP17.4■□□□□ 0.38
VSX1-203ENST00000409285 ORAI1Q96D31 301 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 ELMOD3Q96FG2 381 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 KCTD7Q96MP8 289 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 RBM38Q9H0Z9 239 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms