RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 RLN1P04808 185 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 TPOP07202 933 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 TMIGD3P0DMS9 266 aaPredicted RBP11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF24P17028 368 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF93P35789 620 aaPredicted RBP11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 CBX5P45973 191 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 CX3CR1P49238 355 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 RAC3P60763 192 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 PPIAP62937 165 aaKnown RBP11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 C3AR1Q16581 482 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 SGCAQ16586 387 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 RNFT1Q5M7Z0 435 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 CLVS2Q5SYC1 327 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 CARD17Q5XLA6 110 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 RTL6Q6ICC9 239 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF529Q6P280 563 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 CORO6Q6QEF8 472 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 COMMD2Q86X83 199 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 KCNG3Q8TAE7 436 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 SPTSSAQ969W0 71 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 SEH1LQ96EE3 360 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 PGAM5Q96HS1 289 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 URM1Q9BTM9 101 aaKnown RBP11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 TMPRSS13Q9BYE2 586 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 EXO5Q9H790 373 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 PLSCR3Q9NRY6 295 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 B3GNT2Q9NY97 397 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 B4GALT7Q9UBV7 327 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 CGGBP1Q9UFW8 167 aaPredicted RBP11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF736B4DX44 427 aaPredicted RBP11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 DHHO43323 396 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 ZIC3O60481 467 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 DOK2O60496 412 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 CD74P04233 296 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 GSTP1P09211 210 aaKnown RBP11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 RFPL3SP0C7P2 107 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 ENPP1P22413 925 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 MPZP25189 248 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 THBS4P35443 961 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 EFNB2P52799 333 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 GNG2P59768 71 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 HYAL4Q2M3T9 481 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 ACTBL2Q562R1 376 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 NLRC3Q7RTR2 1065 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 OR9K2Q8NGE7 335 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 OR5M1Q8NGP8 315 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 OR1J2Q8NGS2 313 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 OR2T35Q8NGX2 323 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 PP6455Q8WZ26 134 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 GCDHQ92947 438 aaPredicted RBP11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 SPOCK3Q9BQ16 436 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 IFT46Q9NQC8 304 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 ASH2LQ9UBL3 628 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 EIF3KQ9UBQ5 218 aaKnown RBP11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 HRH3Q9Y5N1 445 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 CACNA1CQ13936 2221 aa11.29□□□□□ -0.6
SMARCB1-203ENST00000407082 A0A1B0GTI1 187 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 TUBAL3A6NHL2 446 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 OR2A4O95047 310 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 HPXP02790 462 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 AGAP20933 346 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 GDF1P27539 372 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 RAD52P43351 418 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 MAGEA5P43359 124 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 PRKXP51817 358 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF121P58317 390 aaPredicted RBP11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 MRPS34P82930 218 aaKnown RBP11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 SLC10A1Q14973 349 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 PNLIPRP3Q17RR3 467 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 AWAT2Q6E213 333 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 ASPHD2Q6ICH7 369 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 LPCAT3Q6P1A2 487 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 CFAP77Q6ZQR2 320 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 CHMP1BQ7LBR1 199 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 SLC36A1Q7Z2H8 476 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 ABHD12BQ7Z5M8 362 aaPredicted RBP11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 LYPD6Q86Y78 171 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF101Q8IZC7 436 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 CHST4Q8NCG5 386 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 BEST4Q8NFU0 473 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 OR8H1Q8NGG4 311 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 OR10S1Q8NGN2 331 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 OR14L1PQ8NHC6 308 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 OR51E1Q8TCB6 317 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 AQP3Q92482 292 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 SCGB3A2Q96PL1 93 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 OR2A7Q96R45 310 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 ULBP2Q9BZM5 246 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 CST11Q9H112 138 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 GSX1Q9H4S2 264 aaPredicted RBP11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF703Q9H7S9 590 aaPredicted RBP11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 CNTD2Q9H8S5 307 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF391Q9UJN7 358 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 FLVCR2Q9UPI3 526 aa11.28□□□□□ -0.6
SMARCB1-203ENST00000407082 ACANP16112 2415 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms