RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 OR5AC1P0C628 307 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 HIST1H1TP22492 207 aaPredicted RBP12.52□□□□□ -0.4
DUSP28-202ENST00000405954 OR10J1P30954 320 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 GLIPR1P48060 266 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 COL10A1Q03692 680 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 WDR38Q5JTN6 314 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 DCST2Q5T1A1 773 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 LRRC25Q8N386 305 aaPredicted RBP12.52□□□□□ -0.4
DUSP28-202ENST00000405954 ZNF321PQ8N8H1 164 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 OR1L6Q8NGR2 347 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 ZNRF4Q8WWF5 429 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 LYSMD1Q96S90 227 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 POLR1DQ9Y2S0 133 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 CACNA1DQ01668 2161 aa12.52□□□□□ -0.4
DUSP28-202ENST00000405954 WDR87Q6ZQQ6 2873 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 CEBPZOSA8MTT3 80 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 HIST1H3AP68431 136 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 SP6Q3SY56 376 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 FAHD2BQ6P2I3 314 aaPredicted RBP12.52□□□□□ -0.41
DUSP28-202ENST00000405954 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 C17orf99Q6UX52 265 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 PAQR4Q8N4S7 273 aaPredicted RBP12.52□□□□□ -0.41
DUSP28-202ENST00000405954 FAHD2AQ96GK7 314 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF385AQ96PM9 386 aaKnown RBP12.52□□□□□ -0.41
DUSP28-202ENST00000405954 KCNK6Q9Y257 313 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 SCN3AQ9NY46 2000 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 SGCGQ13326 291 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 ALG10Q5BKT4 473 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 TMEM225Q6GV28 225 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 KLHL24Q6TFL4 600 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 RCBTB1Q8NDN9 531 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 GNRHR2Q96P88 292 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 SDF2Q99470 211 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 PRSS27Q9BQR3 290 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 PLEKHA2Q9HB19 425 aa12.52□□□□□ -0.41
DUSP28-202ENST00000405954 SCN8AQ9UQD0 1980 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 SOX1O00570 391 aaPredicted RBP12.51□□□□□ -0.41
DUSP28-202ENST00000405954 KLF4O43474 513 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 DANCRP0C864 163 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 GABREP78334 506 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 MRPS11P82912 194 aaKnown RBP12.51□□□□□ -0.41
DUSP28-202ENST00000405954 ENDOGQ14249 297 aaKnown RBP12.51□□□□□ -0.41
DUSP28-202ENST00000405954 CEBPEQ15744 281 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 MPV17LQ2QL34 196 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 ANKRD55Q3KP44 614 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 DMRTC1Q5HYR2 192 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 MFSD12Q6NUT3 480 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 KCTD18Q6PI47 426 aaPredicted RBP12.51□□□□□ -0.41
DUSP28-202ENST00000405954 TMPRSS7Q7RTY8 843 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF573Q86YE8 665 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 OR4X1Q8NH49 305 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 VN1R17PQ8TDU5 208 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 BTF3L4Q96K17 158 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 MRGPRX3Q96LB0 322 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 SLC26A1Q9H2B4 701 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 BANF2Q9H503 90 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 WDR76Q9H967 626 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 HHLA2Q9UM44 414 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 KLHDC2Q9Y2U9 406 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 CEACAM1P13688 526 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 GABRA4P48169 554 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 VEGFBP49765 207 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 ELLP55199 621 aaPredicted RBP12.51□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF92Q03936 586 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 FZD2Q14332 565 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 ATP6V1FQ16864 119 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 TMEM64Q6YI46 380 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 MED25Q71SY5 747 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 TSLPQ969D9 159 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 ZNF552Q9H707 407 aaPredicted RBP12.51□□□□□ -0.41
DUSP28-202ENST00000405954 FBXO34Q9NWN3 711 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 RHBDD3Q9Y3P4 386 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 SCN5AQ14524 2016 aa12.51□□□□□ -0.41
DUSP28-202ENST00000405954 C4orf47A7E2U8 309 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 E5RGE8 158 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 ABLIM3O94929 683 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 CRYABP02511 175 aaKnown RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 DUSP2Q05923 314 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 CLN3Q13286 438 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 TMEM183BQ1AE95 376 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 NPSR1Q6W5P4 371 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 AMZ2Q86W34 360 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 OR14L1PQ8NHC6 308 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 REEP6Q96HR9 211 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 ALKBH7Q9BT30 221 aaPredicted RBP12.5□□□□□ -0.41
DUSP28-202ENST00000405954 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 NSG2Q9Y328 171 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 INSL5Q9Y5Q6 135 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 WDFY3Q8IZQ1 3526 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 PLXND1Q9Y4D7 1925 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 OPN1MWP04001 364 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 OPN1MW2P0DN77 364 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 OPN1MW3P0DN78 364 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 CD33P20138 364 aa12.5□□□□□ -0.41
DUSP28-202ENST00000405954 BCKDHBP21953 392 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms