RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 BMPR1BO00238 502 aa8.81□□□□□ -1
HERC3-202ENST00000402738 CDC42EP2O14613 210 aa8.81□□□□□ -1
HERC3-202ENST00000402738 ZNF154Q13106 437 aa8.81□□□□□ -1
HERC3-202ENST00000402738 BSXQ3C1V8 233 aa8.81□□□□□ -1
HERC3-202ENST00000402738 PRAMEF5Q5TYX0 476 aa8.81□□□□□ -1
HERC3-202ENST00000402738 PRAMEF6Q5VXH4 476 aa8.81□□□□□ -1
HERC3-202ENST00000402738 METRNLQ641Q3 311 aa8.81□□□□□ -1
HERC3-202ENST00000402738 ZNF880Q6PDB4 577 aa8.81□□□□□ -1
HERC3-202ENST00000402738 TMPRSS11FQ6ZWK6 438 aa8.81□□□□□ -1
HERC3-202ENST00000402738 MAML2Q8IZL2 1156 aaPredicted RBP8.81□□□□□ -1
HERC3-202ENST00000402738 R3HDMLQ9H3Y0 253 aa8.81□□□□□ -1
HERC3-202ENST00000402738 LYRM4Q9HD34 91 aa8.81□□□□□ -1
HERC3-202ENST00000402738 GSN-AS1Q9NRJ2 163 aa8.81□□□□□ -1
HERC3-202ENST00000402738 PISDQ9UG56 409 aa8.81□□□□□ -1
HERC3-202ENST00000402738 LRP12Q9Y561 859 aa8.81□□□□□ -1
HERC3-202ENST00000402738 TRBV5-3A0A0A0MS03 114 aa8.81□□□□□ -1
HERC3-202ENST00000402738 ZNF737O75373 536 aa8.81□□□□□ -1
HERC3-202ENST00000402738 CEBPBP17676 345 aa8.81□□□□□ -1
HERC3-202ENST00000402738 IL10RAQ13651 578 aa8.81□□□□□ -1
HERC3-202ENST00000402738 DEFB133Q30KQ1 61 aa8.81□□□□□ -1
HERC3-202ENST00000402738 OR4N2Q8NGD1 307 aa8.81□□□□□ -1
HERC3-202ENST00000402738 OTOSQ8NHW6 89 aa8.81□□□□□ -1
HERC3-202ENST00000402738 C4orf45Q96LM5 186 aa8.81□□□□□ -1
HERC3-202ENST00000402738 NMES1Q9C002 83 aa8.81□□□□□ -1
HERC3-202ENST00000402738 SFXN1Q9H9B4 322 aa8.81□□□□□ -1
HERC3-202ENST00000402738 NUP98P52948 1817 aa8.81□□□□□ -1
HERC3-202ENST00000402738 SERPINE3A8MV23 424 aa8.81□□□□□ -1
HERC3-202ENST00000402738 RNF224P0DH78 156 aa8.81□□□□□ -1
HERC3-202ENST00000402738 BMP5P22003 454 aa8.81□□□□□ -1
HERC3-202ENST00000402738 RPS16P62249 146 aaKnown RBP8.81□□□□□ -1
HERC3-202ENST00000402738 B4GALNT1Q00973 533 aa8.81□□□□□ -1
HERC3-202ENST00000402738 PNRC1Q12796 327 aaPredicted RBP8.81□□□□□ -1
HERC3-202ENST00000402738 C11orf42Q8N5U0 333 aa8.81□□□□□ -1
HERC3-202ENST00000402738 OR2C3Q8N628 320 aa8.81□□□□□ -1
HERC3-202ENST00000402738 RDH5Q92781 318 aa8.81□□□□□ -1
HERC3-202ENST00000402738 PINX1Q96BK5 328 aaKnown RBP8.81□□□□□ -1
HERC3-202ENST00000402738 ATP5SQ99766 215 aa8.81□□□□□ -1
HERC3-202ENST00000402738 S1PR5Q9H228 398 aa8.81□□□□□ -1
HERC3-202ENST00000402738 DUXBA0A1W2PPF3 345 aa8.81□□□□□ -1
HERC3-202ENST00000402738 DEGS1O15121 323 aa8.81□□□□□ -1
HERC3-202ENST00000402738 ALOX12BO75342 701 aa8.81□□□□□ -1
HERC3-202ENST00000402738 ZFAND5O76080 213 aa8.81□□□□□ -1
HERC3-202ENST00000402738 NTN1O95631 604 aa8.81□□□□□ -1
HERC3-202ENST00000402738 TIMP1P01033 207 aa8.81□□□□□ -1
HERC3-202ENST00000402738 CLN3Q13286 438 aa8.81□□□□□ -1
HERC3-202ENST00000402738 LAIR1Q6GTX8 287 aa8.81□□□□□ -1
HERC3-202ENST00000402738 TBX15Q96SF7 602 aa8.81□□□□□ -1
HERC3-202ENST00000402738 SH3BGRL2Q9UJC5 107 aa8.81□□□□□ -1
HERC3-202ENST00000402738 MRPL33O75394 65 aaKnown RBP8.8□□□□□ -1
HERC3-202ENST00000402738 VSIG10L2P0DP72 767 aa8.8□□□□□ -1
HERC3-202ENST00000402738 HIST1H1DP16402 221 aaKnown RBP8.8□□□□□ -1
HERC3-202ENST00000402738 CRISP2P16562 243 aa8.8□□□□□ -1
HERC3-202ENST00000402738 TBXA2RP21731 343 aa8.8□□□□□ -1
HERC3-202ENST00000402738 ZNF345Q14585 488 aa8.8□□□□□ -1
HERC3-202ENST00000402738 NHLRC3Q5JS37 347 aa8.8□□□□□ -1
HERC3-202ENST00000402738 COL5A1-AS1Q5SY13 56 aa8.8□□□□□ -1
HERC3-202ENST00000402738 ZNF468Q5VIY5 522 aaPredicted RBP8.8□□□□□ -1
HERC3-202ENST00000402738 CLEC18BQ6UXF7 455 aa8.8□□□□□ -1
HERC3-202ENST00000402738 C19orf43Q9BQ61 176 aa8.8□□□□□ -1
HERC3-202ENST00000402738 PARP11Q9NR21 331 aa8.8□□□□□ -1
HERC3-202ENST00000402738 G3V3Y1 287 aa8.8□□□□□ -1
HERC3-202ENST00000402738 TNFRSF10CO14798 259 aa8.8□□□□□ -1
HERC3-202ENST00000402738 RECKO95980 971 aa8.8□□□□□ -1
HERC3-202ENST00000402738 TGIF2LXQ8IUE1 241 aa8.8□□□□□ -1
HERC3-202ENST00000402738 ZNRF4Q8WWF5 429 aa8.8□□□□□ -1
HERC3-202ENST00000402738 WBP2Q969T9 261 aa8.8□□□□□ -1
HERC3-202ENST00000402738 ERGIC1Q969X5 290 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CCNL2Q96S94 520 aaPredicted RBP8.8□□□□□ -1
HERC3-202ENST00000402738 TXNIPQ9H3M7 391 aa8.8□□□□□ -1
HERC3-202ENST00000402738 SERTM2A0A1B0GWG4 89 aa8.8□□□□□ -1
HERC3-202ENST00000402738 ADAM20O43506 726 aa8.8□□□□□ -1
HERC3-202ENST00000402738 HPP00738 406 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CT45A6P0DMU7 189 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CT45A5P0DMU8 189 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CT45A7P0DMV0 189 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CT45A8P0DMV1 189 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CT45A9P0DMV2 189 aa8.8□□□□□ -1
HERC3-202ENST00000402738 RCC1P18754 421 aaPredicted RBP8.8□□□□□ -1
HERC3-202ENST00000402738 LIMK1P53667 647 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CT45A2Q5DJT8 189 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CT45A1Q5HYN5 189 aa8.8□□□□□ -1
HERC3-202ENST00000402738 CT45A3Q8NHU0 189 aa8.8□□□□□ -1
HERC3-202ENST00000402738 VN1R17PQ8TDU5 208 aa8.8□□□□□ -1
HERC3-202ENST00000402738 ADGRG7Q96K78 797 aa8.8□□□□□ -1
HERC3-202ENST00000402738 KNL1Q8NG31 2342 aa8.8□□□□□ -1
HERC3-202ENST00000402738 PQLC2LA1A4F0 135 aa8.8□□□□□ -1
HERC3-202ENST00000402738 MPTX1A8MV57 137 aa8.8□□□□□ -1
HERC3-202ENST00000402738 EIF4E2O60573 245 aaKnown RBP8.8□□□□□ -1
HERC3-202ENST00000402738 CYBAP13498 195 aa8.8□□□□□ -1
HERC3-202ENST00000402738 TCN2P20062 427 aa8.8□□□□□ -1
HERC3-202ENST00000402738 SCAND1P57086 179 aa8.8□□□□□ -1
HERC3-202ENST00000402738 SURF2Q15527 256 aaPredicted RBP8.8□□□□□ -1
HERC3-202ENST00000402738 VWA1Q6PCB0 445 aa8.8□□□□□ -1
HERC3-202ENST00000402738 STARD4Q96DR4 205 aa8.8□□□□□ -1
HERC3-202ENST00000402738 FBXO34Q9NWN3 711 aa8.8□□□□□ -1
HERC3-202ENST00000402738 DNMT3BQ9UBC3 853 aaKnown RBP8.8□□□□□ -1
HERC3-202ENST00000402738 DHCR7Q9UBM7 475 aaKnown RBP8.8□□□□□ -1
HERC3-202ENST00000402738 FAM166BA8MTA8 275 aa8.79□□□□□ -1
HERC3-202ENST00000402738 ARPC3O15145 178 aa8.79□□□□□ -1
HERC3-202ENST00000402738 TRGC2P03986 189 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms