RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 LIN7CQ9NUP9 197 aaKnown RBP12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 HDGFL3Q9Y3E1 203 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 A0A1B0GTL3 188 aa12.77□□□□□ -0.36
PCDHA11-201ENST00000398640 B4E171 279 aa12.77□□□□□ -0.36
PCDHA11-201ENST00000398640 TSPAN7P41732 249 aa12.77□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC26A1Q9H2B4 701 aa12.77□□□□□ -0.36
PCDHA11-201ENST00000398640 IKZF5Q9H5V7 419 aa12.77□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM129A0AVI4 362 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 JUNBP17275 347 aaPredicted RBP12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 SNRPNP63162 240 aaKnown RBP12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 SLC17A1Q14916 467 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 NKG7Q16617 165 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNF528Q3MIS6 628 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 BTNL3Q6UXE8 466 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 ANKRD53Q8N9V6 530 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNRF4Q8WWF5 429 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 RND1Q92730 232 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 FAM103A1Q9BTL3 118 aaKnown RBP12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 ARPC4-TTLL3A0A0A6YYG9 625 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 GPANK1O95872 356 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 PPP1CAP62136 330 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 PRR27Q6MZM9 219 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 TMEM108Q6UXF1 575 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 CNRIP1Q96F85 164 aaPredicted RBP12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 TTC3P53804 2025 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 TOX4O94842 621 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 CCL2P13500 99 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 ASCL1P50553 236 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 Q56UQ5 140 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 PDZD11Q5EBL8 140 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 RAB1BQ9H0U4 201 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 HES4Q9HCC6 221 aa12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 MYOZ1Q9NP98 299 aaPredicted RBP12.77□□□□□ -0.37
PCDHA11-201ENST00000398640 PDGFAP04085 211 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 KTI12Q96EK9 354 aaPredicted RBP12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 DLL4Q9NR61 685 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 TAAR3PQ9P1P4 343 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 LRP3O75074 770 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 ADRA2CP18825 462 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 FCER1GP30273 86 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNF628Q5EBL2 1059 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 DRAM2Q6UX65 266 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 NDFIP1Q9BT67 221 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 TIMM9Q9Y5J7 89 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 KCNE3Q9Y6H6 103 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 SBF1O95248 1867 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 ALG1L2C9J202 215 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 TERTO14746 1132 aaKnown RBP12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 CD3EP07766 207 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 GP2P55259 537 aaKnown RBP12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 ACY3Q96HD9 319 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 DDOQ99489 341 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 PSENENQ9NZ42 101 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 ANGPTL7O43827 346 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 OR2J3O76001 311 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 OSR2Q8N2R0 312 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNF785A8K8V0 405 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 H3BMH7 237 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 MICBQ29980 383 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 FAM122CQ6P4D5 195 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 TMEM65Q6PI78 240 aa12.76□□□□□ -0.37
PCDHA11-201ENST00000398640 A0A0A6YYD5 115 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 CTSVO60911 334 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 OR2F2O95006 317 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 METTL15P1P0C7V9 234 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 PTBP1P26599 531 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 ARRB2P32121 409 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 FZD5Q13467 585 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 OR4Q3Q8NH05 313 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 GALMQ96C23 342 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 TCEAL7Q9BRU2 100 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 LPAR2Q9HBW0 351 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 DEFB108AA8MXU0 73 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 SOX15O60248 233 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 PIGPP57054 158 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 RNPS1Q15287 305 aaKnown RBP12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 OR2T2Q6IF00 324 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 SLC36A1Q7Z2H8 476 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 RPEQ96AT9 228 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 A0A0A6YYJ9 748 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 COX7A2P2O60397 106 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 GPX5O75715 221 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 CD160O95971 181 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 RAF1P04049 648 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 SUMO3P55854 103 aaPredicted RBP12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 TNFAIP6P98066 277 aaPredicted RBP12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 STAC2Q6ZMT1 411 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 HIST2H3AQ71DI3 136 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 FAM26EQ8N5C1 309 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 ERGIC1Q969X5 290 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 MARC2Q969Z3 335 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 STRAPQ9Y3F4 350 aaKnown RBP12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 TAS2R45P59539 299 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 MARCH1Q8TCQ1 289 aa12.75□□□□□ -0.37
PCDHA11-201ENST00000398640 DNASE2BQ8WZ79 361 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms