RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SLC2A8Q9NY64 477 aa16.15■□□□□ 0.18
CHRFAM7A-202ENST00000397827 IGKV1-9A0A0C4DH69 117 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ZIC3O60481 467 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 SPDEFO95238 335 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 S100PP25815 95 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 SLC6A9P48067 706 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 KCNMB1Q16558 191 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ZNF468Q5VIY5 522 aaPredicted RBP16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 OR5M8Q8NGP6 311 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 TSNAXQ99598 290 aaKnown RBP16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ADAT1Q9BUB4 502 aaKnown RBP16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ZNF700Q9H0M5 742 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 MYOZ1Q9NP98 299 aaPredicted RBP16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 LOC102725191A0A1B0GVB3 256 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 OR5H15A6NDH6 313 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 LIFP15018 202 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CASRP41180 1078 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 MICBQ29980 383 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ADAD2Q8NCV1 583 aaKnown RBP16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 PXT1Q8NFP0 134 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ANGPTL4Q9BY76 406 aa16.14■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CCDC163A0A0D9SF12 145 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 OR5H14A6NHG9 310 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 C9J4A7 227 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CDC14BO60729 498 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CRYBA1P05813 215 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 GUCA1AP43080 201 aaPredicted RBP16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 PTGFRP43088 359 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 SSR4P51571 173 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ELP2Q6IA86 826 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 PGAP1Q75T13 922 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ZNF546Q86UE3 836 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 SLC25A42Q86VD7 318 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 PUSL1Q8N0Z8 303 aaKnown RBP16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CASTOR1Q8WTX7 329 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 PGAM5Q96HS1 289 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 LYZL4Q96KX0 146 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 RBM24Q9BX46 236 aaKnown RBP16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 FN3KRPQ9HA64 309 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 PLEKHA6Q9Y2H5 1048 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CRTAPO75718 401 aaPredicted RBP16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 SNAPC5O75971 98 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 AKR1C4P17516 323 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 VAMP1P23763 118 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ZBTB25P24278 435 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 AVPR2P30518 371 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 TMEM50BP56557 158 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 IL13RA1P78552 427 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 EXT1Q16394 746 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 DOK3Q7L591 496 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 NAXDQ8IW45 347 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 OR14K1Q8NGZ2 314 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 SLC39A7Q92504 469 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 RAB3CQ96E17 227 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 TMEM59Q9BXS4 323 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 MBD2Q9UBB5 411 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 DKKL1Q9UK85 242 aa16.13■□□□□ 0.17
CHRFAM7A-202ENST00000397827 NPIPA2E9PIF3 369 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 NPIPA3F8WFD2 350 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 TNFSF11O14788 317 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 IFNA6P05013 189 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 RPA2P15927 270 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 MSR1P21757 451 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 FKBP2P26885 142 aaKnown RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 GRB2P62993 217 aaKnown RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 LYG2Q86SG7 212 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 RPS19BP1Q86WX3 136 aaKnown RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 UBALD2Q8IYN6 164 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 BOLLQ8N9W6 283 aaKnown RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 OR10K1Q8NGX5 313 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ZNF837Q96EG3 531 aaPredicted RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 FBLN5Q9UBX5 448 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 C9orf170A2RU37 121 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 NTN3O00634 580 aaPredicted RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 RAD51DO75771 328 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 IGHV2-70P01814 119 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CYC1P08574 325 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CD63P08962 238 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CCL1P22362 96 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 DSCR4P56555 118 aaPredicted RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 SNTB1Q13884 538 aaKnown RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ENDOGQ14249 297 aaKnown RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ZNF660Q6AZW8 331 aaPredicted RBP16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 C1QL2Q7Z5L3 287 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 DTWD2Q8NBA8 298 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 OR4K15Q8NH41 348 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 KCNG3Q8TAE7 436 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 PAQR8Q8TEZ7 354 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 NELFAQ9H3P2 528 aa16.12■□□□□ 0.17
CHRFAM7A-202ENST00000397827 A0A087WZY1 265 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 NSG1A0A0A6YYJ2 146 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 DBHP09172 617 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 RD3LP0DJH9 198 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ATXN7L3Q14CW9 347 aaPredicted RBP16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 TMEM17Q86X19 198 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 OR2Y1Q8NGV0 311 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 MARCH1Q8TCQ1 289 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 ARHGAP5-AS1Q96IT6 56 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 SCGNO76038 276 aa16.11■□□□□ 0.17
CHRFAM7A-202ENST00000397827 CHRM2P08172 466 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms