RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 EREGO14944 169 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 ARPC3O15145 178 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 GPRIN2O60269 458 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 NSA2O95478 260 aaKnown RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 RENP00797 406 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CLPSP04118 112 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CTLA4P16410 223 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PSMB6P28072 239 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 MSX1P28360 303 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 LPAR6P43657 344 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CAPZBP47756 277 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 ACTBP60709 375 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 RPS4XP62701 263 aaKnown RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 ACTG1P63261 375 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 GLO1Q04760 184 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 SSBP1Q04837 148 aaKnown RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 PLCXD2Q0VAA5 305 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 GAGE1Q13065 139 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PRTGQ2VWP7 1150 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 C2orf76Q3KRA6 126 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 AARDQ4LEZ3 155 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 KRTCAP3Q53RY4 240 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 GLYATL3Q5SZD4 288 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 KIAA0895LQ68EN5 471 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 SLC16A9Q7RTY1 509 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PEG10Q86TG7 708 aaKnown RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 RTN4RL2Q86UN3 420 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PAQR4Q8N4S7 273 aaPredicted RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 POC1BQ8TC44 478 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CMBLQ96DG6 245 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CCNL2Q96S94 520 aaPredicted RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 CMKLR1Q99788 373 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 NMNAT2Q9BZQ4 307 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 ASCL3Q9NQ33 180 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CYTL1Q9NRR1 136 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 HIF3AQ9Y2N7 669 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 COA3Q9Y2R0 106 aaPredicted RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 EMC9Q9Y3B6 208 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 A0A1W2PPC4 97 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 EEF1E1-BLOC1S5C9J1V9 151 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 M0R143 59 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 ADAP1O75689 374 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CD1AP06126 327 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 ASAH2BP0C7U1 165 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 HLA-GP17693 338 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 ALOX5APP20292 161 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PRSS3P35030 304 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CD200P41217 278 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 KIR3DL2P43630 455 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 TAS2R19P59542 299 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 FUT7Q11130 342 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 EIF2B1Q14232 305 aaKnown RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 SLC10A1Q14973 349 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 SLC22A6Q4U2R8 563 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 BTNL8Q6UX41 500 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 UNQ9370/PRO34162Q6UXP9 181 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PPP1R3BQ86XI6 285 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 WDFY1Q8IWB7 410 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 C9orf40Q8IXQ3 194 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 GABRG1Q8N1C3 465 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 ARHGEF39Q8N4T4 335 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 M1APQ8TC57 530 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PACRGQ96M98 296 aaPredicted RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 PHB2Q99623 299 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 OR2S2Q9NQN1 319 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 PARP11Q9NR21 331 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 CUTCQ9NTM9 273 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 TAS2R4Q9NYW5 299 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 HS3ST3A1Q9Y663 406 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 C5orf51A6NDU8 294 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 OR4C45A6NMZ5 311 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 UMAD1C9J7I0 102 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 SRPX2O60687 465 aaPredicted RBP4.46□□□□□ -1.69
SSR1-202ENST00000397511 LRP3O75074 770 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 AMY2AP04746 511 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 CRHP06850 196 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 DCNP07585 359 aaKnown RBP4.46□□□□□ -1.69
SSR1-202ENST00000397511 SOD3P08294 240 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 METTL15P1P0C7V9 234 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 FOLR1P15328 257 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 ZNF28P17035 718 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 IL2RGP31785 369 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 SLC6A9P48067 706 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 DHPSP49366 369 aaPredicted RBP4.46□□□□□ -1.69
SSR1-202ENST00000397511 BLKP51451 505 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 MRPS21P82921 87 aaKnown RBP4.46□□□□□ -1.69
SSR1-202ENST00000397511 GGTLC2Q14390 218 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 MEF2DQ14814 521 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 RSPO4Q2I0M5 234 aaPredicted RBP4.46□□□□□ -1.69
SSR1-202ENST00000397511 MOGAT2Q3SYC2 334 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 ZNF227Q86WZ6 799 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 LRRC18Q8N456 261 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 COMMD1Q8N668 190 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 TSTD1Q8NFU3 115 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 ZNF417Q8TAU3 575 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 CD300LFQ8TDQ1 290 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 GPR148Q8TDV2 347 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms