RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CYB561P49447 251 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 DSCR4P56555 118 aaPredicted RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 CLDN15P56746 228 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 FGL1Q08830 312 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 PLCXD3Q63HM9 321 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 NAXDQ8IW45 347 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 SCARB1Q8WTV0 552 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 FAAP24Q9BTP7 215 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 BCL2L14Q9BZR8 327 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 LPAR5Q9H1C0 372 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 TMEM231Q9H6L2 316 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 TREM1Q9NP99 234 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLC17A5Q9NRA2 495 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 LRFN1Q9P244 771 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 ATG2AQ2TAZ0 1938 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 IGLV3-12A0A075B6K2 115 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 IGHV1-45A0A0A0MS14 117 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 A0A1B0GTI1 187 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 E9PLN8 166 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 H3BUI4 141 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 IL11RAQ14626 422 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 SNAI3Q3KNW1 292 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 ABHD17BQ5VST6 288 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR2Y1Q8NGV0 311 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 ST8SIA2Q92186 375 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 NELFAQ9H3P2 528 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 EML5Q05BV3 1969 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 SULT1C2O00338 296 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 TPPPO94811 219 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 LIFP15018 202 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 CSRP2Q16527 193 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 PLAC9Q5JTB6 97 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLC25A47Q6Q0C1 308 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 CLEC9AQ6UXN8 241 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 MEX3BQ6ZN04 569 aaKnown RBP9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLC51BQ86UW2 128 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 TMED6Q8WW62 240 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 REEP6Q96HR9 211 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 PAPOLGQ9BWT3 736 aaKnown RBP9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 MRPL13Q9BYD1 178 aaKnown RBP9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 HES7Q9BYE0 225 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 SRXN1Q9BYN0 137 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 PARPBPQ9NWS1 579 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 P4HTMQ9NXG6 502 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 A0A0A6YYH2 397 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 A6NJ64 397 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 RFPL4AA6NLU0 287 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 RFPL4AL1F8VTS6 287 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 G3V3Q6 166 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 RAD51DO75771 328 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 CBR3O75828 277 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 FARS2O95363 451 aaKnown RBP9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 IGHMP01871 453 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 ITGB2P05107 769 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 CHRM2P08172 466 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 COX6A1P12074 109 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 FSTP19883 344 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 GTPBP8Q8N3Z3 284 aaPredicted RBP9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 SEMA6DQ8NFY4 1073 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 TERB2Q8NHR7 220 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 CMSS1Q9BQ75 279 aaKnown RBP9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF2Q9BSG1 426 aaPredicted RBP9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 LDAHQ9H6V9 325 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 C12orf49Q9H741 205 aa9.18□□□□□ -0.94
CPSF1P1-201ENST00000397477 CACNA1DQ01668 2161 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 LY6G6EA0A0G2JKS1 128 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 MRPL33O75394 65 aaKnown RBP9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 NXPH3O95157 252 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 ISG15P05161 165 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 M6PRP20645 277 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 ACER2Q5QJU3 275 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 C1orf100Q5SVJ3 147 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 TMEM164Q5U3C3 297 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR10D3Q8NH80 312 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 U3KQA8 63 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 RRASP10301 218 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 SCAND1P57086 179 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 UBE2V2Q15819 145 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 TSPO2Q5TGU0 170 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 C11orf87Q6NUJ2 197 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 C1orf210Q8IVY1 113 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR5AS1Q8N127 324 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 PRR18Q8N4B5 295 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZBTB44Q8NCP5 570 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 CLDN23Q96B33 292 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 HRH4Q9H3N8 390 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLC7A11Q9UPY5 501 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 MUC3AQ02505 3323 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 RPS10-NUDT3A0A1W2PQS6 291 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF705EA8MWA4 302 aaPredicted RBP9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 NMBP08949 121 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 IL32P24001 234 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 SMCO1Q147U7 214 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 TUSC1Q2TAM9 212 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 CDCP2Q5VXM1 449 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 MRPL14Q6P1L8 145 aaKnown RBP9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 SULF2Q8IWU5 870 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 PXT1Q8NFP0 134 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR5M8Q8NGP6 311 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 FBXW5Q969U6 566 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms