RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LSM2Q9Y333 95 aaKnown RBP7.57□□□□□ -1.2
NDE1-202ENST00000396355 PPIL1Q9Y3C6 166 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 CFAP54Q96N23 3096 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 PTPRSQ13332 1948 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 SCN2AQ99250 2005 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 C1orf226A1L170 272 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 FAM221AA4D161 298 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 JTBO76095 146 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 LY6G5CQ5SRR4 150 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 SAMD13Q5VXD3 122 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 DPY19L4Q7Z388 723 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 SCGB1C1Q8TD33 95 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 SLC35E1Q96K37 410 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 RARRES2Q99969 163 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 ARRDC1-AS1Q9H2J1 176 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 WASHC3Q9Y3C0 194 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 PRAMEF25A6NGN4 478 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 C9J4A7 227 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 E5RGE8 158 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 PROB1E7EW31 1015 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 RAB27BO00194 218 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 SDCBPO00560 298 aaPredicted RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 TP53I11O14683 189 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 HMGB3O15347 200 aaKnown RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 FAM157BP0CG42 384 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 IMPA1P29218 277 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 ACSM1Q08AH1 577 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 KIAA0895LQ68EN5 471 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 LEG1Q6P5S2 330 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 HSD11B1LQ7Z5J1 315 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 SGPP2Q8IWX5 399 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 UEVLDQ8IX04 471 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 OR1P1Q8NH06 330 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 BORCS7Q96B45 105 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 PRRC1Q96M27 445 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 CNN2Q99439 309 aaKnown RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 SLC25A31Q9H0C2 315 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 HS3ST2Q9Y278 367 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 A0A087WUU8 490 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 C9orf170A2RU37 121 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 OR2M5A3KFT3 312 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 LCATP04180 440 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 ATP1B2P14415 290 aaPredicted RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 TIA1P31483 386 aaKnown RBP eCLIP7.56□□□□□ -1.2
NDE1-202ENST00000396355 KLF3P57682 345 aaPredicted RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 RPS23P62266 143 aaKnown RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 RAC1P63000 192 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 HENMT1Q5T8I9 393 aaKnown RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 AWAT2Q6E213 333 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 PLXDC2Q6UX71 529 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 TCEAL8Q8IYN2 117 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 CPXM2Q8N436 756 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 CSNK1A1LQ8N752 337 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 OR51F2Q8NH61 342 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 OR14C36Q8NHC7 312 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 SNIP1Q8TAD8 396 aaKnown RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 WFDC12Q8WWY7 111 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 SLC25A19Q9HC21 320 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 GDE1Q9NZC3 331 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 FBXL17Q9UF56 701 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 ZNF107Q9UII5 783 aaPredicted RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 PLAGL1Q9UM63 463 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 FLNBO75369 2602 aaKnown RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 NPIPA5A0A0B4J1W7 369 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 IDSB3KWA1 339 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 OR2A4O95047 310 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 CFIP05156 583 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 FGF5P12034 268 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 GLRA1P23415 457 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 HTR1FP30939 366 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 ARL3P36405 182 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 CCR2P41597 374 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 CSNK2A1P68400 391 aaPredicted RBP7.56□□□□□ -1.2
NDE1-202ENST00000396355 TGFBR3Q03167 851 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 GPR18Q14330 331 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 ELOCQ15369 112 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 ZNF385BQ569K4 471 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 DMRTC1Q5HYR2 192 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 TMEM215Q68D42 235 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 COMMD6Q7Z4G1 85 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 LAS2Q8IYD9 372 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 CSNK2A3Q8NEV1 391 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 OR4N2Q8NGD1 307 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 Q8WTZ3 238 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 OR2A7Q96R45 310 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 GINS3Q9BRX5 216 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 CACFD1Q9UGQ2 172 aa7.56□□□□□ -1.2
NDE1-202ENST00000396355 KIF26AQ9ULI4 1882 aaPredicted RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 P2RX6O15547 441 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SRPX2O60687 465 aaPredicted RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 EPHA1P21709 976 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 PRLHRP49683 370 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 CLDN2P57739 230 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 RANP62826 216 aaKnown RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 SRSF5Q13243 272 aaKnown RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 ELAVL3Q14576 367 aaKnown RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 MDGA2Q7Z553 956 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 VRK2Q86Y07 508 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 TMEM25Q86YD3 366 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SLC35F2Q8IXU6 374 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms