RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PRR18Q8N4B5 295 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 OR9K2Q8NGE7 335 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 OR2AE1Q8NHA4 323 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 SECTM1Q8WVN6 248 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 ADIPOR1Q96A54 375 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 PIK3IP1Q96FE7 263 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 GNRHR2Q96P88 292 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 METTL9Q9H1A3 318 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 SMCO4Q9NRQ5 59 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 UQCC1Q9NVA1 299 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 URGCP-MRPS24S4R325 110 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 RALGAPA1Q6GYQ0 2036 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 DAOP14920 347 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 HTR5AP47898 357 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 RRADP55042 308 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 MOB3CQ70IA8 216 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF695Q8IW36 515 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 UQCC2Q9BRT2 126 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 NIT2Q9NQR4 276 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 OR5AC2Q9NZP5 309 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 NDRG3Q9UGV2 375 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 ESPL1Q14674 2120 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 CHD7Q9P2D1 2997 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 ANKUB1A6NFN9 424 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 M0R135 149 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 APOC1P02654 83 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 SFTA3P0C7M3 94 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 RD3LP0DJH9 198 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 RCC1P18754 421 aaPredicted RBP14.31□□□□□ -0.12
PCDH1-203ENST00000394536 TSPO2Q5TGU0 170 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 SEMA6DQ8NFY4 1073 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 RNF133Q8WVZ7 376 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 EMG1Q92979 244 aaKnown RBP14.31□□□□□ -0.12
PCDH1-203ENST00000394536 PHYHIPLQ96FC7 376 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF799Q96GE5 643 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 PBDC1Q9BVG4 233 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 REG4Q9BYZ8 158 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 OR6C76A6NM76 312 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 TRIM77I1YAP6 450 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 SFT2D2O95562 160 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 TBPP20226 339 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 PIGPP57054 158 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 FOXK1P85037 733 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 ST7LQ8TDW4 575 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 OR5H15A6NDH6 313 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 PATE4P0C8F1 98 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF44P15621 663 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 GPR85P60893 370 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 SNRPEP62304 92 aaKnown RBP14.3□□□□□ -0.12
PCDH1-203ENST00000394536 PTCRAQ6ISU1 281 aaPredicted RBP14.3□□□□□ -0.12
PCDH1-203ENST00000394536 NANPQ8TBE9 248 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 ISOC2Q96AB3 205 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF524Q96C55 264 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 H3BMH7 237 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 PTGFRP43088 359 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 RPS18P62269 152 aaKnown RBP14.3□□□□□ -0.12
PCDH1-203ENST00000394536 RPS4Y2Q8TD47 263 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 FAAP24Q9BTP7 215 aa14.3□□□□□ -0.12
PCDH1-203ENST00000394536 LRRK1Q38SD2 2015 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 PRR19A6NJB7 356 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 GLAP06280 429 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 OTX2P32243 289 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 TEX30Q5JUR7 227 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 PLCXD3Q63HM9 321 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 NAA40Q86UY6 237 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 REEP6Q96HR9 211 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 DUSP15Q9H1R2 295 aaPredicted RBP14.29□□□□□ -0.12
PCDH1-203ENST00000394536 FN3KRPQ9HA64 309 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 MS4A18H0YCH9 400 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 TSPAN2O60636 221 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 WISP1O95388 367 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 MSR1P21757 451 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 SLC35A1P78382 337 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 IKZF1Q13422 519 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 MS4A18Q3C1V0 323 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF519Q8TB69 540 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 MPTX1A8MV57 137 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 MBTPS2O43462 519 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 ID4P47928 161 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 MALLQ13021 153 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 UQCC3Q6UW78 93 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 SLC38A9Q8NBW4 561 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 RTN4IP1Q8WWV3 396 aaPredicted RBP14.29□□□□□ -0.12
PCDH1-203ENST00000394536 HDHD3Q9BSH5 251 aaPredicted RBP14.29□□□□□ -0.12
PCDH1-203ENST00000394536 G6PC2Q9NQR9 355 aa14.29□□□□□ -0.12
PCDH1-203ENST00000394536 PURGQ9UJV8 347 aaKnown RBP14.29□□□□□ -0.12
PCDH1-203ENST00000394536 GPR179Q6PRD1 2367 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 RAB19A4D1S5 217 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 S100A2P29034 98 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 NPBWR1P48145 328 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 RAB13P51153 203 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 GRB2P62993 217 aaKnown RBP14.28□□□□□ -0.12
PCDH1-203ENST00000394536 SOHLH1Q5JUK2 328 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 PRSS54Q6PEW0 395 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 SUMF2Q8NBJ7 301 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 NOXO1Q8NFA2 376 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 IL1F10Q8WWZ1 152 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 TCEAL3Q969E4 200 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 MAGT1Q9H0U3 335 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 FANCFQ9NPI8 374 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms