RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 SLC25A43Q8WUT9 341 aaPredicted RBP8.81□□□□□ -1
COL17A1-203ENST00000393211 PP6455Q8WZ26 134 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 SLC39A7Q92504 469 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 ZC3H10Q96K80 434 aaKnown RBP8.81□□□□□ -1
COL17A1-203ENST00000393211 C12orf57Q99622 126 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 EMC6Q9BV81 110 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 PECRQ9BY49 303 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 HRH4Q9H3N8 390 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 BANF2Q9H503 90 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 PNRC2Q9NPJ4 139 aaKnown RBP8.81□□□□□ -1
COL17A1-203ENST00000393211 EHFQ9NZC4 300 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 PPP4R1LQ9P1A2 415 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 EDARQ9UNE0 448 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 CHD9Q3L8U1 2897 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 KCNAB3O43448 404 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 EFNA2O43921 213 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 MED6O75586 246 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 IFNA21P01568 189 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 CRYBA1P05813 215 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 SFTA3P0C7M3 94 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 FOLR1P15328 257 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 CPT2P23786 658 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 RPL12P30050 165 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 AKR1D1P51857 326 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ZNF133P52736 654 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 RAB5BP61020 215 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 DLX2Q07687 328 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 KISS1Q15726 138 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 DEFB133Q30KQ1 61 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ANKRD37Q7Z713 158 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 SGPP2Q8IWX5 399 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 PRSS58Q8IYP2 241 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ZNF283Q8N7M2 679 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 UBAC2Q8NBM4 344 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 CADM4Q8NFZ8 388 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 SNIP1Q8TAD8 396 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 RXFP4Q8TDU9 374 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ROBO4Q8WZ75 1007 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ZNF501Q96CX3 271 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 ARV1Q9H2C2 271 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 TUBA4BQ9H853 241 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 OR2S2Q9NQN1 319 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 VDAC3Q9Y277 283 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 HDGFL3Q9Y3E1 203 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 B3GALT1Q9Y5Z6 326 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 V9GYS6 101 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 IGKV1-9A0A0C4DH69 117 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 MEX3AA1L020 520 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 COLCA2A8K830 154 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 K7EPK0 472 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 TOX3O15405 576 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 LRP3O75074 770 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 DEDDO75618 318 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ZNF708P17019 499 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 GLRA1P23415 457 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 BLVRBP30043 206 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 PMELP40967 661 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 EIF1P41567 113 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 RPL35P42766 123 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 LPAR6P43657 344 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 DHPSP49366 369 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 MEOX2P50222 304 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 UCP2P55851 309 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 OR1D5P58170 312 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 RBM39Q14498 530 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 C1orf189Q5VU69 101 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 RPL7L1Q6DKI1 246 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 RHBDD2Q6NTF9 364 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 WDR74Q6RFH5 385 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 FAM71E2Q8N5Q1 922 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 TSTD1Q8NFU3 115 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 FNDC9Q8TBE3 224 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 POC1BQ8TC44 478 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 STT3BQ8TCJ2 826 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ZNF775Q96BV0 537 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 KIRREL1Q96J84 757 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 FAM71F1Q96KD3 344 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 SPACA5Q96QH8 159 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ADAT1Q9BUB4 502 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 ST6GALNAC5Q9BVH7 336 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 ESRP2Q9H6T0 727 aaKnown RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 FGF21Q9NSA1 209 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 FAM212BQ9NTI7 297 aaPredicted RBP8.8□□□□□ -1
COL17A1-203ENST00000393211 KLRF1Q9NZS2 232 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 TIMM10BQ9Y5J6 103 aa8.8□□□□□ -1
COL17A1-203ENST00000393211 PCDH15Q96QU1 1955 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 PMS2P1A4D2B8 440 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 CRYM-AS1A6NIL9 109 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 PCP4L1A6NKN8 68 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 AQP7P3A6NL99 342 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 ZNF726A6NNF4 738 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 FAM157AC9JC47 383 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 PRSS44E7EML9 344 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 H3BML4 177 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 DHRS3O75911 302 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 S100A8P05109 93 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 HPNP05981 417 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 HEXBP07686 556 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms