RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 UBAC2Q8NBM4 344 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 OR5AU1Q8NGC0 362 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 OR10A7Q8NGE5 316 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 OR2T34Q8NGX1 318 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 OR2T3Q8NH03 318 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 OR8S1Q8NH09 359 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 ANGPTL6Q8NI99 470 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 FIBINQ8TAL6 211 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 C16orf78Q8WTQ4 265 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 NAT14Q8WUY8 206 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 TNFAIP8L1Q8WVP5 186 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 SPRYD4Q8WW59 207 aaPredicted RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC13A3Q8WWT9 602 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 ST8SIA4Q92187 359 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 P3H4Q92791 437 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 GGHQ92820 318 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 GHSRQ92847 366 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 RIT1Q92963 219 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 HIST1H2BAQ96A08 127 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 SYAP1Q96A49 352 aaPredicted RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 ADIPOR1Q96A54 375 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 C10orf35Q96D05 121 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 HVCN1Q96D96 273 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 RAB39BQ96DA2 213 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 MUCL1Q96DR8 90 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 KCNS1Q96KK3 526 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 ZNF396Q96N95 335 aaPredicted RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 PANX3Q96QZ0 392 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 RASL10BQ96S79 203 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 SECISBP2Q96T21 854 aaKnown RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 KCNK16Q96T55 309 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC6A7Q99884 636 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC30A2Q9BRI3 323 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 MRPL45Q9BRJ2 306 aaKnown RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 ADPGKQ9BRR6 497 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 OSBPL8Q9BZF1 889 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 TOLLIPQ9H0E2 274 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 POLR3FQ9H1D9 316 aaPredicted RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 PDE7BQ9NP56 450 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 CCNB1IP1Q9NPC3 277 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 NLRC4Q9NPP4 1024 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC39A9Q9NUM3 307 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 ACER3Q9NUN7 267 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 RBM22Q9NW64 420 aaKnown RBP eCLIP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 MED29Q9NX70 200 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 GIN1Q9NXP7 522 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 MRPL39Q9NYK5 338 aaKnown RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 DNAJC27Q9NZQ0 273 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 SNX7Q9UNH6 387 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 COPS3Q9UNS2 423 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 FARSAQ9Y285 508 aaKnown RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 PTRH2Q9Y3E5 179 aaKnown RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 ARID2Q68CP9 1835 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 UTP20O75691 2785 aaKnown RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 NBASA2RRP1 2371 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 TRRAPQ9Y4A5 3859 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A0C4DFX4 3053 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 NYNRINQ9P2P1 1898 aaKnown RBP-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 NRCAMQ92823 1304 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 DOCK3Q8IZD9 2030 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 CFAP46Q8IYW2 2715 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 ACACAQ13085 2346 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 CSPG4Q6UVK1 2322 aa-0.67□□□□□ -2.52
TRAJ28-201ENST00000390509 KNTC1P50748 2209 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 MED13LQ71F56 2210 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 MSH6P52701 1360 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 HTTP42858 3142 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SCN4AP35499 1836 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SNRNP200O75643 2136 aaKnown RBP-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 MED12LQ86YW9 2145 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TRAV25A0A0B4J276 109 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 IGHV1-69DA0A0B4J2H0 117 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 hCG_1642624A0A1W2PR95 340 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A1W2PRD5 423 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A1W2PRF3 423 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A1W2PRM7 423 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TCRBV21S2A2A0A5A6 115 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM235A6NFC5 223 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 C11orf86A6NJI1 115 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 KBTBD13C9JR72 458 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 F6UB75 175 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 J3QLI3 93 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 K7EQZ3 153 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 L7N2F9 121 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SGK494L7N484 410 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 M0R1X1 148 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 M0R3E3 92 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 GPR31O00270 319 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 BCL9O00512 1426 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 RGS5O15539 181 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 EEF1E1O43324 174 aaKnown RBP-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC25A20O43772 301 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC37A4O43826 429 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 ZBTB14O43829 449 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 CXCL13O43927 109 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 FMO6PO60774 539 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 PFKFB2O60825 505 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TDP2O95551 362 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SCGB1D1O95968 90 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SERPINA3P01011 423 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms