RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 PCK2Q16822 640 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 ATPAF1Q5TC12 328 aaPredicted RBP13.67□□□□□ -0.22
BRF1-203ENST00000379937 METTL11BQ5VVY1 283 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 PLCXD3Q63HM9 321 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 BAIAP2L2Q6UXY1 529 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 MEX3BQ6ZN04 569 aaKnown RBP13.67□□□□□ -0.22
BRF1-203ENST00000379937 MISPQ8IVT2 679 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 SKA3Q8IX90 412 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 SLC22A24Q8N4F4 322 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 IL1F10Q8WWZ1 152 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 SLX1AQ9BQ83 275 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 PIGQQ9BRB3 760 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 BCL2L14Q9BZR8 327 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 NUP210LQ5VU65 1888 aa13.67□□□□□ -0.22
BRF1-203ENST00000379937 HS3ST1O14792 307 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 PHYHO14832 338 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 CBR3O75828 277 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 LYZL6O75951 148 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 ECDO95905 644 aaPredicted RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 PTBP1P26599 531 aaKnown RBP eCLIP13.66□□□□□ -0.226e-11■■■■■ 37.1
BRF1-203ENST00000379937 ZNF84P51523 738 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 TLE1Q04724 770 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 GLDNQ6ZMI3 551 aaPredicted RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 ZNF100Q8IYN0 542 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 CCDC107Q8WV48 283 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 ZBTB8AQ96BR9 441 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 CPNE2Q96FN4 548 aaPredicted RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 F5H5P2 479 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 NDUFB6O95139 128 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 PPP3CBP16298 524 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 NPBWR2P48146 333 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 DSCR4P56555 118 aaPredicted RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 SNTB1Q13884 538 aaKnown RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 PABPC1L2AQ5JQF8 200 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 ZIC4Q8N9L1 334 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 OR2AK2Q8NG84 335 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 LIPHQ8WWY8 451 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 TMEM231Q9H6L2 316 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 TREM2Q9NZC2 230 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 A0A0B4J2A0 478 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 TSPAN4O14817 238 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 GEMIN2O14893 280 aaKnown RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 UBCP0CG48 685 aaKnown RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 GALP22466 123 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 P2RY4P51582 365 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 TMEM50BP56557 158 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 ARF1P84077 181 aaKnown RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 ZNF92Q03936 586 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 LTC4SQ16873 150 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 MICBQ29980 383 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 SLC25A26Q70HW3 274 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 C12orf45Q8N5I9 185 aaPredicted RBP13.66□□□□□ -0.22
BRF1-203ENST00000379937 ZCCHC4Q9H5U6 513 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 ZNF442Q9H7R0 627 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 SHPKQ9UHJ6 478 aa13.66□□□□□ -0.22
BRF1-203ENST00000379937 CDX4O14627 284 aaPredicted RBP13.65□□□□□ -0.22
BRF1-203ENST00000379937 MT-CO3P00414 261 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 CD53P19397 219 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 SEC61A1P61619 476 aaKnown RBP13.65□□□□□ -0.22
BRF1-203ENST00000379937 VHLLQ6RSH7 139 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 ZNF546Q86UE3 836 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 COMMD7Q86VX2 200 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 RDH5Q92781 318 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 UTP23Q9BRU9 249 aaKnown RBP13.65□□□□□ -0.22
BRF1-203ENST00000379937 GPR160Q9UJ42 338 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 SCP2D1Q9UJQ7 156 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 SULT1B1O43704 296 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 LUMP51884 338 aaPredicted RBP13.65□□□□□ -0.22
BRF1-203ENST00000379937 MC2RQ01718 297 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 ROM1Q03395 351 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 ZFP36L1Q07352 338 aaKnown RBP13.65□□□□□ -0.22
BRF1-203ENST00000379937 SPIN3Q5JUX0 258 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 TEX261Q6UWH6 196 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 FBXL14Q8N1E6 418 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 SLC25A28Q96A46 364 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 FOXB1Q99853 325 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 PRSS50Q9UI38 385 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 U3KQ87 197 aa13.65□□□□□ -0.22
BRF1-203ENST00000379937 LILRA1O75019 489 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 RAF1P04049 648 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 LPLP06858 475 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 GPM6AP51674 278 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 PSG4Q00888 419 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 ENDOGQ14249 297 aaKnown RBP13.64□□□□□ -0.23
BRF1-203ENST00000379937 NAXDQ8IW45 347 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 SLC43A2Q8N370 569 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 GJC3Q8NFK1 279 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 PPP1R1CQ8WVI7 109 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 SGK3Q96BR1 496 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 TEX13DA0A0J9YY54 714 aaPredicted RBP13.64□□□□□ -0.23
BRF1-203ENST00000379937 ZNF503-AS2A6NEH8 195 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 CSF1P09603 554 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 PER3P56645 1201 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 ARPC4P59998 168 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 ERVS71-1P61550 626 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 EXT1Q16394 746 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 POTEKPQ9BYX7 375 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 PIEZO1Q92508 2521 aa13.64□□□□□ -0.23
BRF1-203ENST00000379937 F8VVB4 439 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms