RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CDIPTO14735 213 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 KCNAB3O43448 404 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 CLPXO76031 633 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 CST4P01036 141 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 CLUP10909 449 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 PSKH1P11801 424 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 CALB2P22676 271 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 TGFBR2P37173 567 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
HDAC6-204ENST00000376643 ACSM1Q08AH1 577 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 MIDNQ504T8 468 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 SLC35D3Q5M8T2 416 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 STUMQ69YW2 141 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 KCTD8Q6ZWB6 473 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 PRSS45Q7RTY3 260 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 OTOSQ8NHW6 89 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 FAM81AQ8TBF8 368 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 ITPKCQ96DU7 683 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 ASB9Q96DX5 294 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 DCTN5Q9BTE1 182 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 YY1AP1Q9H869 796 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 VPREB3Q9UKI3 123 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 MEGF8Q7Z7M0 2845 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 A0A1W2PPH5 198 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 C5orf63A6NC05 138 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 CST1P01037 141 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 IGHV4-59P01825 116 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 ATP6V1B1P15313 513 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 TGM4P49221 684 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 CAV3P56539 151 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 CSNK2BP67870 215 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 RELBQ01201 579 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 PRDX4Q13162 271 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 IKZF1Q13422 519 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 TAF9Q16594 264 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 KCTD18Q6PI47 426 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-204ENST00000376643 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 C11orf53Q8IXP5 236 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 ZDHHC23Q8IYP9 409 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 ZNF671Q8TAW3 534 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 THEM6Q8WUY1 208 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
HDAC6-204ENST00000376643 NSL1Q96IY1 281 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 RNF170Q96K19 258 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 RAB3IPQ96QF0 476 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-204ENST00000376643 FEVQ99581 238 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 FAM234AQ9H0X4 552 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 OR51V1Q9H2C8 321 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 METTL8Q9H825 291 aaKnown RBP12.15□□□□□ -0.46
HDAC6-204ENST00000376643 TCF7L1Q9HCS4 588 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 BRD7Q9NPI1 651 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 ZNRD1Q9P1U0 126 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 SLC25A10Q9UBX3 287 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-204ENST00000376643 RHBDD3Q9Y3P4 386 aa12.15□□□□□ -0.46
HDAC6-204ENST00000376643 TRBV23-1A0A0A0MS06 115 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 A0A1W2PQ09 198 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 FAM183AA6NL82 134 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 ACOT8O14734 319 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 NPFFO15130 113 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 MAP2K3P46734 347 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 GNG3P63215 75 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 DEGS2Q6QHC5 323 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 WDR86Q86TI4 376 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 FAM216BQ8N7L0 139 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 ZSCAN4Q8NAM6 433 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-204ENST00000376643 OR5D13Q8NGL4 314 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 LINC01006Q8NI28 216 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 DNAJC9Q8WXX5 260 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 OR5P3Q8WZ94 311 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 PKP2Q99959 881 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 NIPSNAP1Q9BPW8 284 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 C16orf95Q9H693 158 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 RAB18Q9NP72 206 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 LAMP5Q9UJQ1 280 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 SF3B6Q9Y3B4 125 aaKnown RBP12.14□□□□□ -0.47
HDAC6-204ENST00000376643 TMEM14AQ9Y6G1 99 aa12.14□□□□□ -0.47
HDAC6-204ENST00000376643 ZNF816-ZNF321PA0A0X1KG74 233 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 hCG_1809904A0A1W2PP81 198 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 A0A1W2PPE2 198 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 A0A1W2PR64 198 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 A0A1W2PRV1 198 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 OR5B21A6NL26 309 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 ZNF850A8MQ14 1090 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-204ENST00000376643 SIGLEC5O15389 551 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 E2F6O75461 281 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 GLRA1P23415 457 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 POU1F1P28069 291 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 UBE2E1P51965 193 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 PROK1P58294 105 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 RPS7P62081 194 aaKnown RBP12.13□□□□□ -0.47
HDAC6-204ENST00000376643 HOXA4Q00056 320 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-204ENST00000376643 POU4F2Q12837 409 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 PPP1R8Q12972 351 aaKnown RBP12.13□□□□□ -0.47
HDAC6-204ENST00000376643 C2orf68Q2NKX9 166 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 KLHL12Q53G59 568 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 ZBTB37Q5TC79 503 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 LCN1P1Q5VSP4 162 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms