RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 C4orf17Q53FE4 359 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF787Q6DD87 383 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 ZAR1Q86SH2 424 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 OR5AS1Q8N127 324 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 BVESQ8NE79 360 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 CHAC2Q8WUX2 184 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 SMIM7Q9BQ49 75 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 COL5A3P25940 1745 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-203ENST00000375274 TGOLN2O43493 480 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 RAB4AP20338 218 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 GLRA1P23415 457 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 TRIM61Q5EBN2 209 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 FAM199XQ6PEV8 388 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-203ENST00000375274 FAM185AQ8N0U4 392 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF784Q8NCA9 323 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF707Q96C28 371 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-203ENST00000375274 SPACA9Q96E40 222 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-203ENST00000375274 TRAF4Q9BUZ4 470 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-203ENST00000375274 IFT22Q9H7X7 185 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 CNTD2Q9H8S5 307 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 PPP1R3CQ9UQK1 317 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 OSGIN2Q9Y236 505 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 POLDIP2Q9Y2S7 368 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 SIRT4Q9Y6E7 314 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-203ENST00000375274 SPRY1O43609 319 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 HAAOP46952 286 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 THBS3P49746 956 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 GCNT2Q8N0V5 402 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF439Q8NDP4 499 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 SPSB1Q96BD6 273 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 KCNK15Q9H427 330 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 GAR1Q9NY12 217 aaKnown RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 FAM96BQ9Y3D0 163 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 UNC13CQ8NB66 2214 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 FAM166BA8MTA8 275 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 KLRC4-KLRK1H3BQV0 150 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ENDOGQ14249 297 aaKnown RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 TBC1D28Q2M2D7 210 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 PRSS54Q6PEW0 395 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ALKBH3Q96Q83 286 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 RPP25Q9BUL9 199 aaKnown RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 RTL8AQ9BWD3 113 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 CHST6Q9GZX3 395 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 UBR3Q6ZT12 1888 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 A0A096LPE4 126 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 A0A1W2PPZ6 126 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 C5orf49A4QMS7 147 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 PTGFRP43088 359 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 H3F3AP84243 136 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 DUSP2Q05923 314 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF573Q86YE8 665 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 OR10P1Q8NGE3 313 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 VSTM2LQ96N03 204 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 VN1R1Q9GZP7 353 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 GHITMQ9H3K2 345 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 C12orf10Q9HB07 376 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF230Q9UIE0 474 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ELF5Q9UKW6 265 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ICE1Q9Y2F5 2266 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 MIA3Q5JRA6 1907 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 IGHV5-51A0A0C4DH38 117 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 YKT6O15498 198 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ADAP1O75689 374 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 B3GALNT1O75752 331 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 IAPPP10997 89 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 FUT3P21217 361 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 SLC37A1P57057 533 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 PPP1CAP62136 330 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 IFITM2Q01629 132 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 ETFDHQ16134 617 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 PRAMEF5Q5TYX0 476 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 PRAMEF6Q5VXH4 476 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 SFTPA1Q8IWL2 248 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 SKA3Q8IX90 412 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 AKR7LQ8NHP1 331 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 RIMS4Q9H426 269 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 GPR160Q9UJ42 338 aa10.32□□□□□ -0.76
PTCH1-203ENST00000375274 RCL1Q9Y2P8 373 aaKnown RBP10.32□□□□□ -0.76
PTCH1-203ENST00000375274 TRAV8-7A0A075B6U6 113 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 IGHV3-64DA0A0J9YX35 117 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF816-ZNF321PA0A0X1KG74 233 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 RAB27BO00194 218 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 MPZL1O95297 269 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 DVL1P1P54792 670 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-203ENST00000375274 ISXQ2M1V0 245 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 OR2B11Q5JQS5 317 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 C1QL3Q5VWW1 255 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 OR10AC1Q8NH08 325 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 OR8U8P0C7N1 319 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 DHODHQ02127 395 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 CD226Q15762 336 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 CATSPERDQ86XM0 798 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 NECAP1Q8NC96 275 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 OR4F5Q8NH21 305 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 GPBAR1Q8TDU6 330 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 FER1L6-AS2Q96M78 137 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 OR4F4Q96R69 305 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 GVINP1Q7Z2Y8 2422 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 PIKFYVEQ9Y2I7 2098 aa10.31□□□□□ -0.76
PTCH1-203ENST00000375274 GPR31O00270 319 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms