RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 SVOPQ8N4V2 548 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 ZFP41Q8N8Y5 198 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 OR51A4Q8NGJ6 313 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 HPSE2Q8WWQ2 592 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 OR5P3Q8WZ94 311 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 RGP1Q92546 391 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-201ENST00000374673 FAM168AQ92567 244 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 ERGIC1Q969X5 290 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 PPP1R3EQ9H7J1 279 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 CHODLQ9H9P2 273 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 ZNF275Q9NSD4 429 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-201ENST00000374673 C14orf119Q9NWQ9 140 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 ZNF281Q9Y2X9 895 aa12.71□□□□□ -0.37
HSPG2-201ENST00000374673 LOC100289279A0A1B0GTE1 492 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 LMX1BO60663 402 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 CDC14BO60729 498 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 NRASP01111 189 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 CELP19835 753 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 MAP2K4P45985 399 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 SLC3A1Q07837 685 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 CEACAM21Q3KPI0 293 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 OR13C3Q8NGS6 347 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 GPR148Q8TDV2 347 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 C10orf105Q8TEF2 133 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 PP6455Q8WZ26 134 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 GHSRQ92847 366 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 MICU1Q9BPX6 476 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 RTL8AQ9BWD3 113 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 CHST5Q9GZS9 411 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 FGF23Q9GZV9 251 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-201ENST00000374673 GCM1Q9NP62 436 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
HSPG2-201ENST00000374673 ANKRD61A6NGH8 418 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 A6NIN4 97 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 TMEM210A6NLX4 147 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 LYNX1G3V0Z9 82 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 IFNL4K9M1U5 179 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 TNFAIP8O95379 198 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 LYNX1P0DP58 116 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 GIFP27352 417 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 CHN2P52757 468 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 EMX1Q04741 257 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-201ENST00000374673 MLLT11Q13015 90 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-201ENST00000374673 GPR50Q13585 617 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 RIN1Q13671 783 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 ZNF181Q2M3W8 571 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 HFEQ30201 348 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 YIF1BQ5BJH7 314 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 PRAMEF6Q5VXH4 476 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 PLCXD3Q63HM9 321 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 ZNF773Q6PK81 442 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 SPNS3Q6ZMD2 512 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 MOB3CQ70IA8 216 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 ZNF367Q7RTV3 350 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 WDR86Q86TI4 376 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 SPARTQ8N0X7 666 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 OR5A2Q8NGI9 324 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 Q8TCH9 128 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 TSEN15Q8WW01 171 aaKnown RBP12.69□□□□□ -0.38
HSPG2-201ENST00000374673 ADAT3Q96EY9 351 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-201ENST00000374673 Q96MF0 132 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 TECTBQ96PL2 329 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 HIST1H2AAQ96QV6 131 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 GPR173Q9NS66 373 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 DHDHQ9UQ10 334 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 PPP1R3CQ9UQK1 317 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 CACNG2Q9Y698 323 aa12.69□□□□□ -0.38
HSPG2-201ENST00000374673 TRBV5-5A0A0J9YX44 114 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 PNMA8CA0A1B0GUJ8 204 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 OR5B21A6NL26 309 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 VWC2LB2RUY7 222 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 GATBO75879 557 aaKnown RBP12.68□□□□□ -0.38
HSPG2-201ENST00000374673 SERPINA3P01011 423 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 ZNF20P17024 532 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 PCMT1P22061 227 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 THBS2P35442 1172 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 TMEM33P57088 247 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
HSPG2-201ENST00000374673 ZNF154Q13106 437 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 CARTPTQ16568 116 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 FAM76BQ5HYJ3 339 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 CEP78Q5JTW2 689 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 UTS2BQ765I0 119 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 MOGAT3Q86VF5 341 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 TGIF2LYQ8IUE0 185 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 PARP16Q8N5Y8 322 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 OR1M1Q8NGA1 313 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 CCL17Q92583 94 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 FGGYQ96C11 551 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 RNF170Q96K19 258 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 OPALINQ96PE5 141 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 MGLLQ99685 303 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 PIMREGQ9BSJ6 248 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 TLNRD1Q9H1K6 362 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
HSPG2-201ENST00000374673 IGHV4-30-2A0A087WSY4 118 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 CLDN25C9JDP6 229 aa12.67□□□□□ -0.38
HSPG2-201ENST00000374673 OCM2P0CE71 109 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms