RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 RAB33BQ9H082 229 aa13.09□□□□□ -0.31
COL9A2-202ENST00000372748 NPIPA1Q9UND3 350 aa13.09□□□□□ -0.31
COL9A2-202ENST00000372748 ABCA7Q8IZY2 2146 aa13.09□□□□□ -0.31
COL9A2-202ENST00000372748 K7EPK0 472 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 PET100P0DJ07 73 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 FPR2P25090 351 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 FOXK1P85037 733 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 NSDHLQ15738 373 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 VAX1Q5SQQ9 334 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 C16orf47Q6ZP98 133 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-202ENST00000372748 FAM71E2Q8N5Q1 922 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 TMEM59Q9BXS4 323 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 RGCCQ9H4X1 137 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 SEBOXQ9HB31 216 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-202ENST00000372748 SPACA1Q9HBV2 294 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 PARP11Q9NR21 331 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 EHFQ9NZC4 300 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 MS4A18H0YCH9 400 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 CDC14BO60729 498 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 CLN5O75503 358 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 TSPAN15O95858 294 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 SCGB1D2O95969 90 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 IGKV3-11P04433 115 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 OR8U8P0C7N1 319 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 MYF5P13349 255 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 FCGR2CP31995 323 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 TMEM33P57088 247 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 CSNK2A1P68400 391 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-202ENST00000372748 MS4A18Q3C1V0 323 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 MIDNQ504T8 468 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 TMEM268Q5VZI3 342 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 C5orf46Q6UWT4 87 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 ABHD12BQ7Z5M8 362 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-202ENST00000372748 GKN2Q86XP6 184 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 CSNK2A3Q8NEV1 391 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 OR10S1Q8NGN2 331 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 C11orf40Q8WZ69 217 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 DNAJB11Q9UBS4 358 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 LSM5Q9Y4Y9 91 aaKnown RBP13.08□□□□□ -0.32
COL9A2-202ENST00000372748 KPTNQ9Y664 436 aa13.08□□□□□ -0.32
COL9A2-202ENST00000372748 TLCD2A6NGC4 264 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 CST4P01036 141 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 HCKP08631 526 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 RPS2P15880 293 aaKnown RBP13.07□□□□□ -0.32
COL9A2-202ENST00000372748 SNU13P55769 128 aaKnown RBP13.07□□□□□ -0.32
COL9A2-202ENST00000372748 EIF5AP63241 154 aaKnown RBP13.07□□□□□ -0.32
COL9A2-202ENST00000372748 IL15RAQ13261 267 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 NCMAPQ5T1S8 102 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 FAM71F1Q96KD3 344 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-202ENST00000372748 GPER1Q99527 375 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 EIF5A2Q9GZV4 153 aaKnown RBP13.07□□□□□ -0.32
COL9A2-202ENST00000372748 OR51M1Q9H341 326 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 ALG1L2C9J202 215 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 NDUFS6O75380 124 aaKnown RBP13.07□□□□□ -0.32
COL9A2-202ENST00000372748 C1QL1O75973 258 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 CHRM2P08172 466 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 RAB5AP20339 215 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 OR10H5Q8NGA6 315 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-202ENST00000372748 ASB10Q8WXI3 467 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 C1orf147Q96MC9 270 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-202ENST00000372748 VPS13AQ96RL7 3174 aa13.07□□□□□ -0.32
COL9A2-202ENST00000372748 SCGNO76038 276 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 IGFBP4P22692 258 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 GSK3AP49840 483 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 OR1D5P58170 312 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 TSC22D1Q15714 1073 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 Q7L0L9 218 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 PEG10Q86TG7 708 aaKnown RBP13.06□□□□□ -0.32
COL9A2-202ENST00000372748 OR9K2Q8NGE7 335 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 ERGIC1Q969X5 290 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 BSCL2Q96G97 398 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-202ENST00000372748 OR5B2Q96R09 309 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 SPAG17Q6Q759 2223 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 CABIN1Q9Y6J0 2220 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 IGHV3-20A0A0C4DH32 117 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 A0A1W2PPE2 198 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 TAAR5O14804 337 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 GSTP1P09211 210 aaKnown RBP13.06□□□□□ -0.32
COL9A2-202ENST00000372748 PAX6P26367 422 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 GALNSP34059 522 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 ARL4DP49703 201 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 TDGQ13569 410 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 GRINAQ7Z429 371 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 OR5AS1Q8N127 324 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 MESP1Q9BRJ9 268 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 CNTNAP3Q9BZ76 1288 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 DUSP15Q9H1R2 295 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-202ENST00000372748 METTL1Q9UBP6 276 aaKnown RBP13.06□□□□□ -0.32
COL9A2-202ENST00000372748 CEACAM18A8MTB9 384 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 IGHMP01871 453 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 NME1P15531 152 aaKnown RBP13.06□□□□□ -0.32
COL9A2-202ENST00000372748 CD38P28907 300 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 PTGER4P35408 488 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 GLP1RP43220 463 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 PCK2Q16822 640 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 RNF212Q495C1 297 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 DNM1P34Q6PK57 102 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 LANCL3Q6ZV70 420 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms