RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 RAB12Q6IQ22 244 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 PNLDC1Q8NA58 520 aaKnown RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 SPERTQ8NA61 448 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 KCNG3Q8TAE7 436 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 GPX8Q8TED1 209 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 APOBEC3DQ96AK3 386 aaPredicted RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 REPIN1Q9BWE0 567 aaKnown RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 LPAR5Q9H1C0 372 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 DPAGT1Q9H3H5 408 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 A0A1W2PP11 408 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 MEIS3P1A6NDR6 274 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 MBD3L4A6NDZ8 208 aaPredicted RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 MBD3L3A6NE82 208 aaPredicted RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 MBD3L5A6NJ08 208 aaPredicted RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 INMT-MINDY4F8WBC2 141 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 RRP8O43159 456 aaKnown RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 CDC14BO60729 498 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 TNFSF13O75888 250 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 NRASP01111 189 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 NGFP01138 241 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 TCRBP04435 133 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 UBBP0CG47 229 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 GK2Q14410 553 aaPredicted RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 MBD3L2Q8NHZ7 208 aaPredicted RBP13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 UBASH3BQ8TF42 649 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 SPSB1Q96BD6 273 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 BANF2Q9H503 90 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 STARD10Q9Y365 291 aa13.48□□□□□ -0.25
GTF3C5-204ENST00000372108 A0A0A6YYD4 124 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 MPIG6BO95866 241 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 SERPINA5P05154 406 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 APLNRP35414 380 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 VEGFCP49767 419 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 MTCP1P56278 107 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 RAB25P57735 213 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 GABRA6Q16445 453 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 ZNF260Q3ZCT1 412 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 SLC22A6Q4U2R8 563 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 OLFML2AQ68BL7 652 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 AKAP14Q86UN6 197 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 TNFAIP8L1Q8WVP5 186 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 AQP3Q92482 292 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 NICN1Q9BSH3 213 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 ING4Q9UNL4 249 aa13.47□□□□□ -0.25
GTF3C5-204ENST00000372108 IGKV1-27A0A075B6S5 117 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 A0A1W2PR80 420 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 TMEM235A6NFC5 223 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 SULT1C2O00338 296 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 TOXO94900 526 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 LPLP06858 475 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 PRKACBP22694 351 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 WNT5AP41221 380 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 HLXQ14774 488 aaPredicted RBP13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 CNN3Q15417 329 aaKnown RBP13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 TSC22D1Q15714 1073 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 PCGF3Q3KNV8 242 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 ZNF324BQ6AW86 544 aaPredicted RBP13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 SFRP4Q6FHJ7 346 aaPredicted RBP13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 STARD4Q96DR4 205 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 POFUT1Q9H488 388 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 NUDT15Q9NV35 164 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 GHRLQ9UBU3 117 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 BSNQ9UPA5 3926 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 NUBP2Q9Y5Y2 271 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 ALG5Q9Y673 324 aa13.46□□□□□ -0.25
GTF3C5-204ENST00000372108 ZNF816-ZNF321PA0A0X1KG74 233 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 FAM230AA0A1W2PPH8 454 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 NAP1L6A6NFF2 107 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 CRTAPO75718 401 aaPredicted RBP13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 CGAP01215 116 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 TPOP07202 933 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 ZNF14P17017 642 aaPredicted RBP13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 COX5AP20674 150 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 ZP1P60852 638 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 BTG1P62324 171 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 SF3B4Q15427 424 aaKnown RBP eCLIP13.46□□□□□ -0.262e-7■■□□□ 12.7
GTF3C5-204ENST00000372108 CDNFQ49AH0 187 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 KRTCAP3Q53RY4 240 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 ZBTB37Q5TC79 503 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 FAAP20Q6NZ36 180 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 FAM180AQ6UWF9 173 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 MYPOPQ86VE0 399 aaPredicted RBP13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 CCDC36Q8IYA8 594 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 GABRG1Q8N1C3 465 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 CHST4Q8NCG5 386 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 SLC30A7Q8NEW0 376 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 OR10R2Q8NGX6 335 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 NUDT16L1Q9BRJ7 211 aaKnown RBP13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 SCPEP1Q9HB40 452 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 ZNF71Q9NQZ8 489 aaPredicted RBP13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 PTTG3PQ9NZH4 202 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 COPZ2Q9P299 210 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 FAM215AQ9Y5M1 114 aa13.46□□□□□ -0.26
GTF3C5-204ENST00000372108 TRAV6A0A075B6T7 132 aa13.45□□□□□ -0.26
GTF3C5-204ENST00000372108 SCGNO76038 276 aa13.45□□□□□ -0.26
GTF3C5-204ENST00000372108 CHRM2P08172 466 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms