RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 MYO7BQ6PIF6 2116 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 PRR14LQ5THK1 2151 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OR6C65A6NJZ3 312 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 MARCH11A6NNE9 402 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ZNF587BE7ETH6 402 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OVOL3O00110 214 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 RER1O15258 196 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OGG1O15527 345 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 SRSF10O75494 262 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 KRT33AO76009 404 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 NCR1O76036 304 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 PNPP00491 289 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 CRHP06850 196 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 CST2P09228 141 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 MMP7P09237 267 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 HSMCR30P0CW71 290 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 IGHV1-2P23083 117 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ANOS1P23352 680 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ZFP36P26651 326 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 DUSP1P28562 367 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OPRL1P41146 370 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 RGS6P49758 472 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ZNF84P51523 738 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 NANOS3P60323 173 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 CTAG1AP78358 180 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ACSM1Q08AH1 577 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 MLLT11Q13015 90 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 TSC22D1Q15714 1073 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 STK11Q15831 433 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 C2orf76Q3KRA6 126 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 SOWAHCQ53LP3 525 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 GPR107Q5VW38 600 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 LIPNQ5VXI9 398 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 LIPKQ5VXJ0 399 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ANKRD16Q6P6B7 361 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ZNF474Q6S9Z5 364 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 TMPRSS11AQ6ZMR5 421 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 Q6ZPA2 131 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 SLC16A12Q6ZSM3 486 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 GPR141Q7Z602 305 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 NOXA1Q86UR1 476 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 CLVS1Q8IUQ0 354 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 PHC2Q8IXK0 858 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 SYS1Q8N2H4 156 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ST6GALNAC3Q8NDV1 305 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OR1K1Q8NGR3 316 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 RNF133Q8WVZ7 376 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 HSD17B8Q92506 261 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 RPL3LQ92901 407 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 SLAMF6Q96DU3 332 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 BBC3Q96PG8 261 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 FUNDC2Q9BWH2 189 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 CACNG6Q9BXT2 260 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ISYNA1Q9NPH2 558 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ACOXLQ9NUZ1 547 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 FAIMQ9NVQ4 179 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 MALT1Q9UDY8 824 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 SH3BGRL2Q9UJC5 107 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 GNG8Q9UK08 70 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 FBXL3Q9UKT7 428 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 PRELID1Q9Y255 219 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 N6AMT1Q9Y5N5 214 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 KMT2BQ9UMN6 2715 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 TRGV8A0A0C4DH27 118 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PNMA8CA0A1B0GUJ8 204 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 C5orf63A6NC05 138 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CGB1A6NKQ9 187 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 USP17L23D6RBM5 183 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 GPX5O75715 221 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SULT1C4O75897 302 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RPP14O95059 124 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 HLA-HP01893 362 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CD36P16671 472 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZNF32P17041 273 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CELP19835 753 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 NPR2P20594 1047 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 GADD45AP24522 165 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 DNASE1P24855 282 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 MAPK3P27361 379 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 PCSK6P29122 969 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 MPGP29372 298 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 GUCA1AP43080 201 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 KIR3DL2P43630 455 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 BMXP51813 675 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RPS25P62851 125 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 PSG4Q00888 419 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RBPJQ06330 500 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 MFGE8Q08431 387 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 GABRA6Q16445 453 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CTF1Q16619 201 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 HIKESHIQ53FT3 197 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SP5Q6BEB4 398 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 DMKNQ6E0U4 476 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR7E24Q6IFN5 339 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZNF813Q6ZN06 617 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 Q6ZT83 130 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 NAA40Q86UY6 237 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ZNF679Q8IYX0 411 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 GABRG1Q8N1C3 465 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TMEM217Q8N7C4 229 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 568.9 ms