RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SDCBPO00560 298 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 IAPPP10997 89 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 ZFP36L2P47974 494 aaKnown RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 PABPC1L2AQ5JQF8 200 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 TMPRSS11FQ6ZWK6 438 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 CNRIP1Q96F85 164 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 DIRC2Q96SL1 478 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 NEURL2Q9BR09 285 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 GON7Q9BXV9 100 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 NSG2Q9Y328 171 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 UBR2Q8IWV8 1755 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 OR5B21A6NL26 309 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 KRTCAP3Q53RY4 240 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 OR10R2Q8NGX6 335 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 CLDN23Q96B33 292 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 KTI12Q96EK9 354 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 OR5M11Q96RB7 305 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 RHNO1Q9BSD3 238 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 SLC25A19Q9HC21 320 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 FZR1Q9UM11 496 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 MYH9P35579 1960 aaKnown RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 TMEM235A6NFC5 223 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF724A8MTY0 619 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 OPRK1P41145 380 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 MAGEB1P43366 347 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 EXOSC2Q13868 293 aaKnown RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 FHL5Q5TD97 284 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 OR10V1Q8NGI7 309 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 NUBPLQ8TB37 319 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 RNASEK-C17orf49H0YIS7 233 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 ORM1P02763 201 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 CISD3P0C7P0 127 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 CDAP32320 146 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 POLR2IP36954 125 aaKnown RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 GPR6P46095 362 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 CELF2-AS1Q8N7Q2 184 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 CMBLQ96DG6 245 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 TVP23CQ96ET8 276 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 PAPPA2Q9BXP8 1791 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 OR6C68A6NDL8 312 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 NKX2-2O95096 273 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 SULT1A3P0DMM9 295 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 SULT1A4P0DMN0 295 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 RRASP10301 218 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 SKP2Q13309 424 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF273Q14593 569 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 CTDSP1Q9GZU7 261 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 MPC1Q9Y5U8 109 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 LANCL1O43813 399 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 OR2J3O76001 311 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 RAC3P60763 192 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 ALKAL2Q6UX46 152 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 CYHR1Q6ZMK1 362 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 TMEM182Q6ZP80 229 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 SMRP1Q8NCR6 262 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 OIT3Q8WWZ8 545 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 RANGRFQ9HD47 186 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 SLC22A13Q9Y226 551 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF320A2RRD8 509 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 SPRY1O43609 319 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 LRP3O75074 770 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 PDGFBP01127 241 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 GLI4P10075 376 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 COL9A1P20849 921 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 RPL35P42766 123 aaKnown RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 OR2B8PP59922 312 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 SPINK14Q6IE38 97 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 OR52N4Q8NGI2 321 aa9.81□□□□□ -0.84
CLIP1-203ENST00000361654 RTN4IP1Q8WWV3 396 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-203ENST00000361654 S100A11P31949 105 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 CD276Q5ZPR3 534 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 ADAM5Q6NVV9 412 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 FAM122CQ6P4D5 195 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 PRSS42Q7Z5A4 293 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 CALHM3Q86XJ0 350 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 SMIM19Q96E16 107 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 PIK3IP1Q96FE7 263 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 RSRP1Q9BUV0 290 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 FOXJ3Q9UPW0 622 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 NPTNQ9Y639 398 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 PPP5D1E7EU14 171 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF32P17041 273 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF117Q03924 483 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 CCDC144NLQ6NUI1 221 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 DGAT2L6Q6ZPD8 337 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 KCNRGQ8N5I3 272 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 PTPMT1Q8WUK0 201 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-203ENST00000361654 DUS3LQ96G46 650 aaKnown RBP9.8□□□□□ -0.84
CLIP1-203ENST00000361654 HSD17B10Q99714 261 aaKnown RBP9.8□□□□□ -0.84
CLIP1-203ENST00000361654 CA10Q9NS85 328 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 COA4Q9NYJ1 87 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 SERGEFQ9UGK8 458 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 ERRFI1Q9UJM3 462 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-203ENST00000361654 ICAM5Q9UMF0 924 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 GAB2Q9UQC2 676 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 OR2M5A3KFT3 312 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 EML2O95834 649 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 HCCSP53701 268 aa9.8□□□□□ -0.84
CLIP1-203ENST00000361654 TUBB1Q9H4B7 451 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms