RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 OR10P1Q8NGE3 313 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 DNASE2BQ8WZ79 361 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 ZNF501Q96CX3 271 aaPredicted RBP12.02□□□□□ -0.49
LDB3-202ENST00000361373 C10orf90Q96M02 699 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 NSG2Q9Y328 171 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 TRIP11Q15643 1979 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 RAB19A4D1S5 217 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 SPRY3O43610 288 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 HLA-HP01893 362 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 NGFRP08138 427 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 NME2P22392 152 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 KLF3P57682 345 aaPredicted RBP12.02□□□□□ -0.49
LDB3-202ENST00000361373 OR10K2Q6IF99 312 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 RHOUQ7L0Q8 258 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 HIF1ANQ9NWT6 349 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 SPAG17Q6Q759 2223 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 LIMS3P0CW19 117 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 LIMS4P0CW20 117 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 TAS2R45P59539 299 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 SPATA46Q5T0L3 261 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 STPG1Q5TH74 334 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 TMEM268Q5VZI3 342 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 SPINK14Q6IE38 97 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 C16orf47Q6ZP98 133 aaPredicted RBP12.02□□□□□ -0.49
LDB3-202ENST00000361373 ACOT7LQ6ZUV0 252 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 DDA1Q9BW61 102 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 ATAD5Q96QE3 1844 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 PRICKLE3O43900 615 aaPredicted RBP12.01□□□□□ -0.49
LDB3-202ENST00000361373 ANKRD34CP0C6C1 535 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 ZNF774Q6NX45 483 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 C15orf54Q8N8G6 183 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 ADPRHL1Q8NDY3 354 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 SCARB1Q8WTV0 552 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 ZNF416Q9BWM5 594 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 SPAARA0A1B0GVQ0 90 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 LGALS8O00214 317 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 ZFPL1O95159 310 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 SNRNP70P08621 437 aaKnown RBP12.01□□□□□ -0.49
LDB3-202ENST00000361373 PPT1P50897 306 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 UBE2MP61081 183 aaKnown RBP12.01□□□□□ -0.49
LDB3-202ENST00000361373 HFEQ30201 348 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 PXT1Q8NFP0 134 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 OR5D13Q8NGL4 314 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 ASB10Q8WXI3 467 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 DERL3Q96Q80 235 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 ARFGEF1Q9Y6D6 1849 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 GPR31O00270 319 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 MBP02144 154 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 HOXD4P09016 255 aaPredicted RBP12.01□□□□□ -0.49
LDB3-202ENST00000361373 CTLA4P16410 223 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 MLF1P58340 268 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 B3GNTL1Q67FW5 361 aaPredicted RBP12.01□□□□□ -0.49
LDB3-202ENST00000361373 RND1Q92730 232 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 MOGAT1Q96PD6 335 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 PCYT1BQ9Y5K3 369 aaPredicted RBP12.01□□□□□ -0.49
LDB3-202ENST00000361373 IGHV3-64DA0A0J9YX35 117 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 HSBP1L1C9JCN9 74 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 PTGFRP43088 359 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 CD226Q15762 336 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 IGFBP7Q16270 282 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 NIPSNAP3BQ9BS92 247 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 AUNIPQ9H7T9 357 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 TAF9BQ9HBM6 251 aa12.01□□□□□ -0.49
LDB3-202ENST00000361373 ZNF275Q9NSD4 429 aaPredicted RBP12.01□□□□□ -0.49
LDB3-202ENST00000361373 STRAPQ9Y3F4 350 aaKnown RBP12.01□□□□□ -0.49
LDB3-202ENST00000361373 MDFIC2A0A1B0GVS7 189 aa12□□□□□ -0.49
LDB3-202ENST00000361373 OR4E1P0C645 316 aa12□□□□□ -0.49
LDB3-202ENST00000361373 CDC20Q12834 499 aa12□□□□□ -0.49
LDB3-202ENST00000361373 SKP2Q13309 424 aa12□□□□□ -0.49
LDB3-202ENST00000361373 PLA1AQ53H76 456 aa12□□□□□ -0.49
LDB3-202ENST00000361373 THSD4Q6ZMP0 1018 aa12□□□□□ -0.49
LDB3-202ENST00000361373 LYG2Q86SG7 212 aa12□□□□□ -0.49
LDB3-202ENST00000361373 ADGRG3Q86Y34 549 aa12□□□□□ -0.49
LDB3-202ENST00000361373 OR2G3Q8NGZ4 309 aa12□□□□□ -0.49
LDB3-202ENST00000361373 C2orf50Q96LR7 162 aa12□□□□□ -0.49
LDB3-202ENST00000361373 CST2P09228 141 aa12□□□□□ -0.49
LDB3-202ENST00000361373 PEBP1P30086 187 aaKnown RBP12□□□□□ -0.49
LDB3-202ENST00000361373 TMUB2Q71RG4 321 aa12□□□□□ -0.49
LDB3-202ENST00000361373 MFSD4AQ8N468 514 aa12□□□□□ -0.49
LDB3-202ENST00000361373 C17orf78Q8N4C9 275 aa12□□□□□ -0.49
LDB3-202ENST00000361373 TM4SF19Q96DZ7 209 aa12□□□□□ -0.49
LDB3-202ENST00000361373 GABRA4P48169 554 aa12□□□□□ -0.49
LDB3-202ENST00000361373 CLDN20P56880 219 aa12□□□□□ -0.49
LDB3-202ENST00000361373 PPP1CBP62140 327 aa12□□□□□ -0.49
LDB3-202ENST00000361373 PRDX4Q13162 271 aa12□□□□□ -0.49
LDB3-202ENST00000361373 BTLAQ7Z6A9 289 aa12□□□□□ -0.49
LDB3-202ENST00000361373 ZNF75AQ96N20 296 aa12□□□□□ -0.49
LDB3-202ENST00000361373 SLC26A1Q9H2B4 701 aa12□□□□□ -0.49
LDB3-202ENST00000361373 TAAR3PQ9P1P4 343 aa12□□□□□ -0.49
LDB3-202ENST00000361373 FOCADQ5VW36 1801 aa12□□□□□ -0.49
LDB3-202ENST00000361373 FAM221AA4D161 298 aa12□□□□□ -0.49
LDB3-202ENST00000361373 SIX6O95475 246 aa12□□□□□ -0.49
LDB3-202ENST00000361373 CD3EP07766 207 aa12□□□□□ -0.49
LDB3-202ENST00000361373 PIGPP57054 158 aa12□□□□□ -0.49
LDB3-202ENST00000361373 TMEM128Q5BJH2 165 aa12□□□□□ -0.49
LDB3-202ENST00000361373 SRRQ9GZT4 340 aa12□□□□□ -0.49
LDB3-202ENST00000361373 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
LDB3-202ENST00000361373 CES1P1Q9UKY3 287 aa12□□□□□ -0.49
LDB3-202ENST00000361373 SEC16AO15027 2179 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms