RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 RAB6AP20340 208 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 RAG2P55895 527 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 COL19A1Q14993 1142 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 BCL2A1Q16548 175 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 GSG1Q2KHT4 349 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 WDR38Q5JTN6 314 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 C9orf152Q5JTZ5 239 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 C6orf183Q5T699 404 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 ANKRD16Q6P6B7 361 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 FAM185AQ8N0U4 392 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 ALKBH3Q96Q83 286 aaPredicted RBP6.25□□□□□ -1.41
RAB5B-201ENST00000360299 TMEM165Q9HC07 324 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 RALYQ9UKM9 306 aaKnown RBP6.25□□□□□ -1.41
RAB5B-201ENST00000360299 IGHV1-45A0A0A0MS14 117 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 TRIM64BA6NI03 449 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 MAGEB4O15481 346 aaPredicted RBP6.25□□□□□ -1.41
RAB5B-201ENST00000360299 FABP7O15540 132 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 DHRS3O75911 302 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 ZFPL1O95159 310 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 ZIC2O95409 532 aaPredicted RBP6.25□□□□□ -1.41
RAB5B-201ENST00000360299 IFNA17P01571 189 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 PMP2P02689 132 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 PRKACAP17612 351 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 CCR6P51684 374 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 DGCR2P98153 550 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 SORDQ00796 357 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 ZNF266Q14584 549 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 OPCMLQ14982 345 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 CEBPEQ15744 281 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 ZXDCQ2QGD7 858 aaPredicted RBP6.25□□□□□ -1.41
RAB5B-201ENST00000360299 SPNS3Q6ZMD2 512 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 CREB3L2Q70SY1 520 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 TMEM229BQ8NBD8 167 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 NPEPL1Q8NDH3 523 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 OR13C5Q8NGS8 318 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 RBM38Q9H0Z9 239 aaKnown RBP6.25□□□□□ -1.41
RAB5B-201ENST00000360299 ZMAT3Q9HA38 289 aaKnown RBP6.25□□□□□ -1.41
RAB5B-201ENST00000360299 PLEKHA3Q9HB20 300 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 KCNIP2Q9NS61 270 aa6.25□□□□□ -1.41
RAB5B-201ENST00000360299 FAM212BQ9NTI7 297 aaPredicted RBP6.25□□□□□ -1.41
RAB5B-201ENST00000360299 IGHV3-64DA0A0J9YX35 117 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 B8ZZF3 427 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 SMPD2O60906 423 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 C1QBP02746 253 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 CCL3P10147 92 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 ACAA2P42765 397 aaKnown RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 MLF1P58340 268 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 GNG3P63215 75 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 ZP4Q12836 540 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 SRSF6Q13247 344 aaKnown RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 PEA15Q15121 130 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 IAH1Q2TAA2 248 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 DMKNQ6E0U4 476 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 SSX8Q7RTT4 187 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 C9orf40Q8IXQ3 194 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 OSR2Q8N2R0 312 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 CELF2-AS1Q8N7Q2 184 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 SCCPDHQ8NBX0 429 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 ASB10Q8WXI3 467 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 HRASLSQ9HDD0 168 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 HS3ST3B1Q9Y662 390 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 NINQ8N4C6 2090 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 TMEM235A6NFC5 223 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 HBE1P02100 147 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 APOC3P02656 99 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 EIF4EP06730 217 aaKnown RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 MGMTP16455 207 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 ATF4P18848 351 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 PTGER4P35408 488 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 SRP9P49458 86 aaKnown RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 CLDN20P56880 219 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 OR10A3P58181 314 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 ARF1P84077 181 aaKnown RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 C10orf111Q8N326 155 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 TMEM52Q8NDY8 209 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 MRPS24Q96EL2 167 aaKnown RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 DERL3Q96Q80 235 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 OR5B12Q96R08 314 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 A0A1B0GVG6 124 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 A0A1W2PS29 197 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 C16orf97H3BN30 126 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 PHF1O43189 567 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 CD1AP06126 327 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 CTLA4P16410 223 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 S100A11P31949 105 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 SNCAP37840 140 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 IGLV3-21P80748 117 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 SSX1Q16384 188 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 GPR157Q5UAW9 335 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 COMMD7Q86VX2 200 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 OR5AS1Q8N127 324 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 ADPRHL1Q8NDY3 354 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 BHLHE23Q8NDY6 225 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 OR2M3Q8NG83 312 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 DVL3Q92997 716 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 ARPC5LQ9BPX5 153 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 TMEM100Q9NV29 134 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 ING1Q9UK53 422 aaPredicted RBP6.24□□□□□ -1.41
RAB5B-201ENST00000360299 DOCK8Q8NF50 2099 aa6.24□□□□□ -1.41
RAB5B-201ENST00000360299 RP1P56715 2156 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms