RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ALDH3B2P48448 385 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 CAV3P56539 151 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ACSM3Q53FZ2 586 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 CALHM1Q8IU99 346 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 OR52H1Q8NGJ2 320 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 TSEN15Q8WW01 171 aaKnown RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 TMEM106AQ96A25 262 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ITPKCQ96DU7 683 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 YIPF6Q96EC8 236 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 DHRS9Q9BPW9 319 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 METTL17Q9H7H0 456 aaPredicted RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 SP140LQ9H930 580 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 GPR173Q9NS66 373 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ZNF275Q9NSD4 429 aaPredicted RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 FAIMQ9NVQ4 179 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ZNF581Q9P0T4 197 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 RABL2AQ9UBK7 228 aaPredicted RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 A0A087WXM4 84 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 TRBV5-5A0A0J9YX44 114 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OVOL3O00110 214 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 WNT9BO14905 357 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 SYT7O43581 403 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 RHBDL1O75783 438 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 HNRNPCP07910 306 aaKnown RBP eCLIP3.41□□□□□ -1.86
LIG4-201ENST00000356922 CLEC2LP0C7M8 214 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CALCBP10092 127 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 RAC2P15153 192 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CD53P19397 219 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 KITLGP21583 273 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 COL8A2P25067 703 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 NR1H2P55055 460 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 RPS23P62266 143 aaKnown RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 MLLT11Q13015 90 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 BLMHQ13867 455 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 ZNF829Q3KNS6 432 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 ZNF718Q3SXZ3 478 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CCDC58Q4VC31 144 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 UNQ9370/PRO34162Q6UXP9 181 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 LYPD6Q86Y78 171 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 FBXL14Q8N1E6 418 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR13F1Q8NGS4 319 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 ZNF420Q8TAQ5 688 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 UBASH3BQ8TF42 649 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 PIGCQ92535 297 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 FBXW5Q969U6 566 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 SORCS2Q96PQ0 1159 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 FUNDC2Q9BWH2 189 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 BCL2L14Q9BZR8 327 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 COMMD4Q9H0A8 199 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR10A2Q9H208 303 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 ZNF442Q9H7R0 627 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 MOV10Q9HCE1 1003 aaKnown RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 NOX4Q9NPH5 578 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 TRIM36Q9NQ86 728 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 NKIRAS2Q9NYR9 191 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 ZNF281Q9Y2X9 895 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CMAHPQ9Y471 501 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 A0A1B0GWJ7 208 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 IQCF6A8MYZ5 107 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CDC14BO60729 498 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 NOL3O60936 208 aaKnown RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 DHRS3O75911 302 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 SERPINA3P01011 423 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CD36P16671 472 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 JUNBP17275 347 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 KLF3P57682 345 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR10A3P58181 314 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 PLA2G7Q13093 441 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CTF1Q16619 201 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 PRAMEF6Q5VXH4 476 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 TMEM42Q69YG0 159 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 C22orf42Q6IC83 251 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CD200R1LQ6Q8B3 271 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 RTN4RL2Q86UN3 420 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 DTX2Q86UW9 622 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 ZNF611Q8N823 705 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR8G5Q8NG78 346 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR2Z1Q8NG97 314 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 OR52N4Q8NGI2 321 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 TRMT10AQ8TBZ6 339 aaKnown RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 RFT1Q96AA3 541 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 ZNF488Q96MN9 340 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 DERL3Q96Q80 235 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 TRAF4Q9BUZ4 470 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 CACNG6Q9BXT2 260 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 KCNK15Q9H427 330 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 ELL3Q9HB65 397 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 NDUFB11Q9NX14 153 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 RHBDL2Q9NX52 303 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 TAS2R4Q9NYW5 299 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 NSD1Q96L73 2696 aaPredicted RBP3.41□□□□□ -1.86
LIG4-201ENST00000356922 DYSFO75923 2080 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 TRBV5-7A0A0A0MS05 114 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 A0A1B0GVI7 797 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 A6NLC8 198 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 GABRPO00591 440 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 FCN3O75636 299 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 GPM6AP51674 278 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 NCS1P62166 190 aa3.41□□□□□ -1.86
LIG4-201ENST00000356922 CBX3Q13185 183 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms