RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 UBE2V1Q13404 147 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 ICAM4Q14773 271 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 EIPR1Q53HC9 387 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 PLPP7Q8NBV4 271 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 ULBP3Q9BZM4 244 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 TRIM2Q9C040 744 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 KLHDC2Q9Y2U9 406 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 TICRRQ7Z2Z1 1910 aa13.97□□□□□ -0.17
RTN3-205ENST00000356000 SOD2P04179 222 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 SPINT3P49223 89 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 LINC01590Q5TEZ4 76 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 TTC9BQ8N6N2 239 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 OR5T1Q8NG75 326 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 OR2L2Q8NH16 312 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 YIPF1Q9Y548 306 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 VAMP2P63027 116 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 DMWDQ09019 674 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 FAM78AQ5JUQ0 283 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 ZNF506Q5JVG8 444 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 ASPHD2Q6ICH7 369 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 OGFOD3Q6PK18 319 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 NUP43Q8NFH3 380 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 SLC35A4Q96G79 324 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 TBX15Q96SF7 602 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 NMNAT3Q96T66 252 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 HSF4Q9ULV5 492 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 LIPGQ9Y5X9 500 aa13.96□□□□□ -0.17
RTN3-205ENST00000356000 KAT7O95251 611 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 SELPP16109 830 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 CTHP32929 405 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 ALDH3B1P43353 468 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 RANP62826 216 aaKnown RBP13.95□□□□□ -0.18
RTN3-205ENST00000356000 TRA2BP62995 288 aaKnown RBP13.95□□□□□ -0.18
RTN3-205ENST00000356000 DUSP2Q05923 314 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 PCK2Q16822 640 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 ADIPOR2Q86V24 386 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 PYGO2Q9BRQ0 406 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 RNF150Q9ULK6 438 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 CENPVL1A0A0U1RR11 272 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 OR2J2O76002 312 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 IL33O95760 270 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 KLKB1P03952 638 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 CEACAM1P13688 526 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 THPOP40225 353 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 PNRC1Q12796 327 aaPredicted RBP13.95□□□□□ -0.18
RTN3-205ENST00000356000 GLYATL3Q5SZD4 288 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 SP5Q6BEB4 398 aaPredicted RBP13.95□□□□□ -0.18
RTN3-205ENST00000356000 TMEM182Q6ZP80 229 aaPredicted RBP13.95□□□□□ -0.18
RTN3-205ENST00000356000 SLC16A9Q7RTY1 509 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 TMEM170AQ8WVE7 144 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 TSEN15Q8WW01 171 aaKnown RBP13.95□□□□□ -0.18
RTN3-205ENST00000356000 PTX4Q96A99 478 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 NUDT11Q96G61 164 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 BOD1Q96IK1 185 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 ADAD1Q96M93 576 aaKnown RBP13.95□□□□□ -0.18
RTN3-205ENST00000356000 DCBLD2Q96PD2 775 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 PCGF1Q9BSM1 259 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 ADAM29Q9UKF5 820 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 OR51B4Q9Y5P0 310 aa13.95□□□□□ -0.18
RTN3-205ENST00000356000 MRPS18BQ9Y676 258 aaKnown RBP13.95□□□□□ -0.18
RTN3-205ENST00000356000 ZNF705FA8MVS1 300 aaPredicted RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 TOMM40O96008 361 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 ZNF705DP0CH99 300 aaPredicted RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 ZNF705BP0CI00 300 aaPredicted RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 ACRP10323 421 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 CD46P15529 392 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 CCKBRP32239 447 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 BMI1P35226 326 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 FZD2Q14332 565 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 ZNF880Q6PDB4 577 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 ZNF66Q6ZN08 573 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 LINC01555Q8NAE3 123 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 DTWD2Q8NBA8 298 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 OR5L2Q8NGL0 311 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 ZPLD1Q8TCW7 415 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 KCNE4Q8WWG9 221 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 TECTBQ96PL2 329 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 KXD1Q9BQD3 176 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 CNTD2Q9H8S5 307 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 P4HTMQ9NXG6 502 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 MRPS2Q9Y399 296 aaKnown RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 MRPS23Q9Y3D9 190 aaKnown RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 AGR2O95994 175 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 DUSP8Q13202 625 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 COL9A2Q14055 689 aaPredicted RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 TAF9Q16594 264 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 TMEM176BQ3YBM2 270 aaPredicted RBP13.94□□□□□ -0.18
RTN3-205ENST00000356000 VPS25Q9BRG1 176 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 ALG12Q9BV10 488 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 TUBD1Q9UJT1 453 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 CLDN16Q9Y5I7 305 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 TRAV39A0A0B4J263 110 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 CDC14CA4D256 554 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 GLOD5A6NK44 160 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 AQP7O14520 342 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 NDUFB2O95178 105 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 TMEM225BP0DP42 221 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 SERPINA4P29622 427 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 DCAF7P61962 342 aa13.94□□□□□ -0.18
RTN3-205ENST00000356000 IAH1Q2TAA2 248 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms