RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 FAHD2AQ96GK7 314 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 SCPEP1Q9HB40 452 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TMEM140Q9NV12 185 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 NRXN3Q9Y4C0 1643 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 PPP5D1E7EU14 171 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 MS4A18H0YCH9 400 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 MICBQ29980 383 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 GSG1Q2KHT4 349 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 MS4A18Q3C1V0 323 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 RPUSD3Q6P087 351 aaKnown RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 DNAJC13O75165 2243 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 MN1Q10571 1320 aaPredicted RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 XKRY2A2RUG3 117 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TRABD2BA6NFA1 517 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 PDGFBP01127 241 aaPredicted RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 CRYABP02511 175 aaKnown RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 ZBTB25P24278 435 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 DGCR2P98153 550 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 CHCHD4Q8N4Q1 142 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 OR2M3Q8NG83 312 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 CLDN23Q96B33 292 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TEAD3Q99594 435 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TRBV23-1A0A0A0MS06 115 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 NEURL1O76050 574 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 MT-ATP6P00846 226 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 CHRM2P08172 466 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 SDHAP31040 664 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TNXAQ16473 311 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 OR2L13Q8N349 312 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 ANGPTL6Q8NI99 470 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 RNF2Q99496 336 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 PCGF1Q9BSM1 259 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 KPTNQ9Y664 436 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 LAMA4Q16363 1823 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 SNRNP200O75643 2136 aaKnown RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 SPAARA0A1B0GVQ0 90 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 C7orf72A4D263 438 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TMPRSS11DO60235 418 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 ACHEP22303 614 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 PCBP4P57723 403 aaKnown RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 SMIM21Q3B7S5 101 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 XKR7Q5GH72 579 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 ACSM5Q6NUN0 579 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 C5orf46Q6UWT4 87 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 NKAIN3Q8N8D7 197 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 OR4S1Q8NGB4 309 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 OR2V1Q8NHB1 315 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 SLC39A13Q96H72 371 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TMEM147Q9BVK8 224 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 LYRM4Q9HD34 91 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TRAV20A0A0B4J274 112 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 RPS4XP62701 263 aaKnown RBP8.99□□□□□ -0.97
COL11A1-201ENST00000353414 RELL2Q8NC24 303 aaPredicted RBP8.99□□□□□ -0.97
COL11A1-201ENST00000353414 BAHD1Q8TBE0 780 aaPredicted RBP8.99□□□□□ -0.97
COL11A1-201ENST00000353414 DDOQ99489 341 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 MIA3Q5JRA6 1907 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 J3QR89 54 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 FCMRO60667 390 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 SPI1P17947 270 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 BSGP35613 385 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 CD200P41217 278 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 GSCP56915 257 aaPredicted RBP8.99□□□□□ -0.97
COL11A1-201ENST00000353414 OSR2Q8N2R0 312 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 MARC2Q969Z3 335 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 ADGRG7Q96K78 797 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 FBXO34Q9NWN3 711 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 PSORS1C1Q9UIG5 152 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 IGKV3OR2-268A0A0C4DH90 116 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 CLDN10P78369 228 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 ELFN2Q5R3F8 820 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 OR1L3Q8NH93 324 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 ZDHHC5Q9C0B5 715 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 MT-ND4LP03901 98 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 TMIGD3P0DMS9 266 aaPredicted RBP8.99□□□□□ -0.97
COL11A1-201ENST00000353414 CD22P20273 847 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 PNLIPRP2P54317 469 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 PCK2Q16822 640 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 ECSCRQ19T08 205 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 Q3ZCU0 254 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 BCL2L2Q92843 193 aaPredicted RBP8.99□□□□□ -0.97
COL11A1-201ENST00000353414 FLYWCH2Q96CP2 140 aaKnown RBP8.99□□□□□ -0.97
COL11A1-201ENST00000353414 SEH1LQ96EE3 360 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 RABAC1Q9UI14 185 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 TCRBV3S1A0A5B6 114 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 OR5H8P0DN80 308 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 CDK5Q00535 292 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 SELENBP1Q13228 472 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 TMEM97Q5BJF2 176 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 RBPMS2Q6ZRY4 209 aaKnown RBP8.99□□□□□ -0.97
COL11A1-201ENST00000353414 FA2HQ7L5A8 372 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 OR13C8Q8NGS7 320 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 TMED6Q8WW62 240 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 TTC9Q92623 222 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 PRO1933Q9H354 126 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 UCK1Q9HA47 277 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 DLL4Q9NR61 685 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 WASHC3Q9Y3C0 194 aa8.99□□□□□ -0.97
COL11A1-201ENST00000353414 M0R296 226 aa8.98□□□□□ -0.97
COL11A1-201ENST00000353414 CEBPEQ15744 281 aa8.98□□□□□ -0.97
COL11A1-201ENST00000353414 FNDC7Q5VTL7 733 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms