RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ASH2LQ9UBL3 628 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 FBLN5Q9UBX5 448 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 ZNF221Q9UK13 617 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 ZNF407Q9C0G0 2248 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 CR1P17927 2039 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 IGHV3-15A0A0B4J1V0 119 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 A0A0U1RQV5 110 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 CIB4A0PJX0 185 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 TUBAL3A6NHL2 446 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 INMT-MINDY4F8WBC2 141 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 SULT1C2O00338 296 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 P2RY10O00398 339 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 TFECO14948 347 aaPredicted RBP7.13□□□□□ -1.27
CD44-205ENST00000352818 CXCL13O43927 109 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 NME2P1O60361 137 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 SCGNO76038 276 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 BPNT1O95861 308 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 CST2P09228 141 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 CD46P15529 392 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ARSBP15848 533 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 NME2P22392 152 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 HTR2CP28335 458 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 BDKRB2P30411 391 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 EIF1AXP47813 144 aaKnown RBP7.13□□□□□ -1.27
CD44-205ENST00000352818 CX3CR1P49238 355 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 LHX2P50458 406 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 RAB25P57735 213 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ZNF121P58317 390 aaPredicted RBP7.13□□□□□ -1.27
CD44-205ENST00000352818 ECH1Q13011 328 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 RAB35Q15286 201 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 TAF13Q15543 124 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 PHYHD1Q5SRE7 291 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 FAM27BQ5VT28 67 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ZNF813Q6ZN06 617 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 SEM1Q6ZVN7 128 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 PGAP1Q75T13 922 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 BTN2A1Q7KYR7 527 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 KRT74Q7RTS7 529 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 TCTE3Q8IZS6 198 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ZBTB8BQ8NAP8 495 aaPredicted RBP7.13□□□□□ -1.27
CD44-205ENST00000352818 TMEM178AQ8NBL3 297 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 PLPP7Q8NBV4 271 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 OR1M1Q8NGA1 313 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 OR51D1Q8NGF3 324 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 OR8B12Q8NGG6 310 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 OR5D14Q8NGL3 314 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 OR1J2Q8NGS2 313 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 OR52I2Q8NH67 350 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 SGMS2Q8NHU3 365 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 FCAMRQ8WWV6 532 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 C10orf35Q96D05 121 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ST6GAL2Q96JF0 529 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 SORCS2Q96PQ0 1159 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 NUDT16L1Q9BRJ7 211 aaKnown RBP7.13□□□□□ -1.27
CD44-205ENST00000352818 TTTY12Q9BZ98 90 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 LINC00470Q9BZP3 86 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ACTR6Q9GZN1 396 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 METTL17Q9H7H0 456 aaPredicted RBP7.13□□□□□ -1.27
CD44-205ENST00000352818 AUNIPQ9H7T9 357 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 RNF122Q9H9V4 155 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 TMEM138Q9NPI0 162 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 PAQR5Q9NXK6 330 aaPredicted RBP7.13□□□□□ -1.27
CD44-205ENST00000352818 TAS2R8Q9NYW2 309 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ATPIF1Q9UII2 106 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ZNF107Q9UII5 783 aaPredicted RBP7.13□□□□□ -1.27
CD44-205ENST00000352818 CLEC4AQ9UMR7 237 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ALG5Q9Y673 324 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ROS1P08922 2347 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 ALPK2Q86TB3 2170 aa7.13□□□□□ -1.27
CD44-205ENST00000352818 OR6C65A6NJZ3 312 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 DHRS7CA6NNS2 312 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 RER1O15258 196 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 DOK2O60496 412 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 TRAPPC6AO75865 159 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 ALX3O95076 343 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 DHFRP00374 187 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 TCRBP04435 133 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 ALDOBP05062 364 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 CSF1P09603 554 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 PAX1P15863 534 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 ZNF708P17019 499 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 RAB3AP20336 220 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 CRYGSP22914 178 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 SELENOPP49908 381 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 CLDN15P56746 228 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 CLDN18P56856 261 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 RRAS2P62070 204 aaPredicted RBP7.12□□□□□ -1.27
CD44-205ENST00000352818 SNTB2Q13425 540 aaKnown RBP7.12□□□□□ -1.27
CD44-205ENST00000352818 SGCAQ16586 387 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 C2orf76Q3KRA6 126 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 KRTAP27-1Q3LI81 207 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 TBRG1Q3YBR2 411 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 CCDC92Q53HC0 331 aaPredicted RBP7.12□□□□□ -1.27
CD44-205ENST00000352818 ATAD3CQ5T2N8 411 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 RAB12Q6IQ22 244 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 AAED1Q7RTV5 226 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 SULF2Q8IWU5 870 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 IZUMO1Q8IYV9 350 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 UBE2J2Q8N2K1 259 aa7.12□□□□□ -1.27
CD44-205ENST00000352818 SLC22A24Q8N4F4 322 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms